Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq43 116 3e-21 >seq43 Length=2457951 Score = 116 bits (128), Expect = 3e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||| ||||| || ||||| || || |||||||| ||||||| ||||| ||||||| Sbjct 2352941 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCG 2352882 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 ||||| || ||||| |||| || |||||||| || || || |||||||||||||| Sbjct 2352881 AGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGG 2352822 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 || || || || | || | |||||| | ||| ||||| | ||| | || || Sbjct 2352821 ATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTC 2352762 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || || || |||||||| Sbjct 2352761 CCCGTGAGGGTCTTGACGAAGATCTGCAT 2352733 Score = 96.9 bits (106), Expect = 3e-15 Identities = 191/278 (69%), Gaps = 6/278 (2%) Strand=Plus/Plus Query 133080 ATCTCCCATGCCGTCTTGAAGAGATTCTTGACATGCTGTGGTATTTCGTCAATGTTCTGC 133139 ||||||||| |||||||| | || |||||||| | || || | | |||||||| Sbjct 1096252 ATCTCCCATACCGTCTTGTACAGGGCCTTGACATCGTCGGGGATGTTGGGGATGTTCTGG 1096311 Query 133140 ACGGACCCGTTTTCGGCCAAAATCTTGTTGCGCAATTC--CGGAGTGTAAATGTCGAGAT 133197 | || |||||||| || | ||| ||| || | |||| | | | |||| | Sbjct 1096312 ATCGAGCCGTTTTCAGCAATAATGCGGTTCTTCATGGCGTCGGACC--ACAGGCCGAGCT 1096369 Query 133198 CGATTAGCGCTTTGACGAGATACTGGTTGACCACTTGAAACTCGCCGGCGAGAACGCGTC 133257 ||| || | |||| || | ||||||| || || ||||||||||| || || || | Sbjct 1096370 CGACCAGGTCCTTGAGCAGCCAGGGGTTGACAACCTGGAACTCGCCGGCCAGGACACGGC 1096429 Query 133258 -TGAGATATACATTCGACGTGAACGGTTCGAAAGATTCGTTGTTGCCGAGTATCTGCGCC 133316 ||| || | || |||||| | || ||||| | || |||||||| || ||||||| | Sbjct 1096430 GCGAG-TAGATGTTGGACGTGTAGGGCTCGAAGCACTCATTGTTGCCCAGGATCTGCGAC 1096488 Query 133317 GTCGTCGCCGTGGGCATGTACGCCACCAACAAAGAGTT 133354 || | |||||||||||| ||||| | | |||||| Sbjct 1096489 GTGCTGGCCGTGGGCATGGGGGCCACAAGTAGAGAGTT 1096526 Score = 93.3 bits (102), Expect = 4e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || ||| || || |||||||| ||| || ||||| ||||| Sbjct 65845 ACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCCTCC 65786 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 ||||| || ||||| |||| ||||||||||| |||||||| |||||||||||||| Sbjct 65785 AGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTC 65730 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830014026516