Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28]
73 sequences; 26,549,069 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq51 125 1e-23
seq43 100 6e-16
>seq51
Length=1305468
Score = 125 bits (138), Expect = 1e-23
Identities = 295/442 (67%), Gaps = 9/442 (2%)
Strand=Plus/Minus
Query 101916 TTGTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCT 101975
|||| ||||||||||| || || || |||||||| || || || || || ||||| ||||
Sbjct 1212910 TTGTCGCCTTTGCTGCTGTCGAGGGCATCTTCTTCAGCGGGGCCTTTGCTTCCATCTTCT 1212851
Query 101976 GGATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGG 102035
|| ||||||| | ||| | |||| ||||| |||| ||| || ||| |||| || | |
Sbjct 1212850 GGCTCAAGAAGCGTGGTCTGATGCCAGGTCTGACCTTCTCTAACGAGCTCATCTCGCGTG 1212791
Query 102036 ACGAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACC- 102094
|||| ||||| || ||||||||| ||| ||||| | | | | |||
Sbjct 1212790 ACGAGGGTCTCCACACCGACTTTGCCTGCCTGCTG----CACTCGCACCTCAAG-CACCG 1212736
Query 102095 --CCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAAT 102152
||| |||| | | || | ||||| |||| || |||||| ||||| | || |
Sbjct 1212735 CGCCAGCAAG-CAGATCATCCACGAAATCATCACCGATGCCGTCGCCATTGAGAAGGAGT 1212677
Query 102153 TTCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGT 102212
| ||||||| | ||||| | | | || ||||| | ||||| ||||
Sbjct 1212676 TCCTCACAGAAGCTCTGCCCTGTGCCCTGCTCGGCATGAATGCCTCCCTGATGCAGCAGT 1212617
Query 102213 ACATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATG 102272
||||||| ||||| ||||| ||| |||| | | || || ||| ||| ||
Sbjct 1212616 ACATTGAGTTTGTCGCAGACCGTCTACTGGTCGCCCTCGGCAACGACAAGGTCTACAACT 1212557
Query 102273 TTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTG 102332
|||||||||||| |||||||| || || ||||| | ||||||||||| || |
Sbjct 1212556 CGACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAACTTCTTCG 1212497
Query 102333 AAAAGAGAGTCGCCGAGTATCA 102354
| ||| | || || || || ||
Sbjct 1212496 AGAAGCGTGTTGCTGACTACCA 1212475
>seq43
Length=2457951
Score = 100 bits (110), Expect = 6e-16
Identities = 185/266 (70%), Gaps = 4/266 (2%)
Strand=Plus/Plus
Query 94779 GTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATA 94838
|| || ||||| || || || ||||||||||| || || | ||| || ||||| ||
Sbjct 1097559 GTTGAGGCCGATGCCACCGGCCGTCTTGGAGATCATGGCACACGTCTTGAGGGTATCGTA 1097618
Query 94839 AATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGG-GTG 94897
|| || |||||||| || || | | | | |||||||||||||| || |||| ||
Sbjct 1097619 TATGCCGTCAATGCTGTCCTCCTTCATATCGACGAGGAAGCACGAGGACAGCTGGGCCTG 1097678
Query 94898 TGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGA 94957
| || || || || || ||||| || || ||||| || | | | |||||||
Sbjct 1097679 AG-GGGTACCGGCGTTGAAAAGGGTGGGAGATGCGTGGGTGAAGCACTTGTTGGACATGA 1097737
Query 94958 GATCATATGTTTCAATGACAGATTTGATG-TCTGATCCGTGAATGCCGACAGCCACACGC 95016
| | ||||| || |||||| | |||| | | | || | |||||||| || ||||||
Sbjct 1097738 GGTTGTATGTCTCGATGACACGCTCGATGTTGTCACCCCAG-ATGCCGACGGCAACACGC 1097796
Query 95017 ATAATCATGTCCTGAGGGCGCTCAAC 95042
|| ||||||| ||| || ||||| ||
Sbjct 1097797 ATGATCATGTGCTGGGGACGCTCGAC 1097822
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989583074429715
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |