Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq51 149 8e-31 >seq51 Length=1305468 Score = 149 bits (164), Expect = 8e-31 Identities = 372/563 (66%), Gaps = 18/563 (3%) Strand=Plus/Plus Query 33582 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGT 33641 || || || ||| ||| ||||||||||| | || | |||||||| || || || Sbjct 1212763 CAGGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAAGGTCAGA 1212822 Query 33642 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAG 33701 || ||||| || |||||||| || ||||| || |||||||| || | ||| |||||| Sbjct 1212823 CCTGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCCCCGCTGAAGAAG 1212882 Query 33702 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGT 33758 || || || || ||||||||||| | ||| | || || | | | || ||| || Sbjct 1212883 ATGCCCTCGACAGCAGCAAAGGCGACAAGACGCTGGGCAAAGGTAGAGTTGCGGTCCTGG 1212942 Query 33759 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33818 |||||| | |||||| ||||||||||| | ||||| || || || ||||| || Sbjct 1212943 ATCCACCTGATAGCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTCTCAATGGCGTTG 1213002 Query 33819 AAGAGATAGtttttttCATTACTA----TCTTTAACATAAGTATCGATCAAAAGACTATA 33874 ||||| || | | | | | || || | || |||||||| | ||| || Sbjct 1213003 AAGAGGTA----TGTGCGCTGGGAGGGTTCCTTGATGTAGGTATCGATGAGGAGAGAGTA 1213058 Query 33875 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 33934 ||||||| |||||||| || || ||||| || |||||||| || | ||||||| Sbjct 1213059 GGTTTCCGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGGGCCTCGGG 1213118 Query 33935 AATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGC 33994 ||||| || || || || || || | | || || || || || |||||| ||| Sbjct 1213119 GATCTGGACCTCGCCACTGAAACGCTCAACGAGGTTCTCGTTGACAATGCCATCAGAGGC 1213178 Query 33995 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC-----TGGTGTTAGTTTA 34049 || || || || | | || || || | || ||||| || || | || Sbjct 1213179 AGCGAAGAAGGCAAGGATGTGAGAGATGAAGAACTTCTCGTCATCATTGATG--CGGTTG 1213236 Query 34050 TTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCT 34109 ||||| || | || || || || | || | || || | ||||| || || ||||| Sbjct 1213237 TTCCAGTCGTGGAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAGAAAGAGGCCTCG 1213296 Query 34110 GCCTTTTTATACATATTCCAGAT 34132 ||||| || ||||| | |||||| Sbjct 1213297 GCCTTCTTGTACATCTGCCAGAT 1213319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629817025291440