Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq51 141 1e-28 seq43 131 2e-25 >seq51 Length=1305468 Score = 141 bits (156), Expect = 1e-28 Identities = 370/561 (66%), Gaps = 14/561 (2%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || || || ||| ||| ||||||||||| | || || ||||| || || || || Sbjct 1212763 CAGGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAAGGTCAGA 1212822 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 || ||||| || |||||||| || ||||| || ||||| ||||| | ||| |||||| Sbjct 1212823 CCTGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCCCCGCTGAAGAAG 1212882 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATA---ACTGGCGCTGTCATGT 50136 || || || || || |||||||| ||||| | || || | | | || ||| || Sbjct 1212883 ATGCCCTCGACAGCAGCAAAGGCGACAAGACGCTGGGCAAAGGTAGAGTTGCGGTCCTGG 1212942 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196 |||||| | |||||| ||||||||||| | ||||| || || || ||||| || Sbjct 1212943 ATCCACCTGATAGCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTCTCAATGGCGTTG 1213002 Query 50197 AAGAGATAGtttttttCATTACTA----TCTTTAACATAAGTATCGATCAAAAGACTATA 50252 ||||| || | | | | | || || | || |||||||| | ||| || Sbjct 1213003 AAGAGGTA----TGTGCGCTGGGAGGGTTCCTTGATGTAGGTATCGATGAGGAGAGAGTA 1213058 Query 50253 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 50312 ||||||| |||||||| || || ||||| || |||||||| || | ||||||| Sbjct 1213059 GGTTTCCGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGGGCCTCGGG 1213118 Query 50313 AATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGC 50372 ||||| || || || || || ||| | | || || || || || || ||| ||| Sbjct 1213119 GATCTGGACCTCGCCACTGAAACGCTCAACGAGGTTCTCGTTGACAATGCCATCAGAGGC 1213178 Query 50373 TGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGT--TGGGTG-TTAGTTTATT 50429 || || || || | | || || || || |||| | || | | || || Sbjct 1213179 AGCGAAGAAGGCAAGGATGTGAGAGATGAAGAACTTCTCGTCATCATTGATGCGGTTGTT 1213238 Query 50430 CCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGC 50489 ||| || | || || || || | || | || || | ||||| || || ||||| || Sbjct 1213239 CCAGTCGTGGAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAGAAAGAGGCCTCGGC 1213298 Query 50490 CTTTTTATACATATTCCAGAT 50510 ||| || ||||| | |||||| Sbjct 1213299 CTTCTTGTACATCTGCCAGAT 1213319 >seq43 Length=2457951 Score = 131 bits (144), Expect = 2e-25 Identities = 446/686 (65%), Gaps = 18/686 (3%) Strand=Plus/Plus Query 79906 GGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATC 79965 || ||||| | || ||| || || | | || || || ||||| ||||| || |||||| Sbjct 1097254 GGGCACATGAGCGTCCAGTCGCCGTTCTTCTCAACACGCTTCATGAAGAGGTCGGGAATC 1097313 Query 79966 CAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGA 80025 || || || | ||||| || | || | |||||| || || ||||| || Sbjct 1097314 CAGAGGGCCAGGAATAGGTCGCGGGCACGGACCTCCTCCTTGCCATGGTTCTTGCGGAGG 1097373 Query 80026 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGT 80085 || |||||| | | | || | ||||| || || | ||||||| | | | || || Sbjct 1097374 TCAAGGAACTCGAAGACGTCGGCGTGCCAAGGCTCGAGGTATATGCAGAAAGCACCGGGA 1097433 Query 80086 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 80145 || ||||| || ||||| || | ||| | || ||||| || || || | | ||| || Sbjct 1097434 CGCTTGTTACCACCCTGGTCGACGTAGCGGGCCGTGTTGTTGTAGACACGTAGCATAGGG 1097493 Query 80146 ATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAAT--AT 80203 | ||||||||||| || || ||||| |||| || ||| || |||| || || Sbjct 1097494 ACGATACCATTGGAGGTGCCGTTGGTGCCGGCAATGTAGGAGCCCGTGGCGCGGATGCGG 1097553 Query 80204 TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAAC 80262 | ||| || || || || || ||| | || ||||| | || || ||| || | Sbjct 1097554 TGGACGTTG--AGGCCGATGCCACCGGCCGTCTTGGAGATCATGGCACA-CGTCTTGAGG 1097610 Query 80263 GTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATT 80322 ||||| || ||||| || ||||| || || |||| | | || || || |||| Sbjct 1097611 GTATCGTATATGCCGTCAATGCTGTCCTCCTTCATATCGACGAGGAAGCACGAGGACAGC 1097670 Query 80323 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCA 80382 ||| || || || || || || | ||| ||||| ||||| || || || || | Sbjct 1097671 TGGGCCTGAGGGGTACCGGCGTTGAAAAGGGTGGGAGATGCGTGGGTGAAGCACTTGTTG 1097730 Query 80383 GACAGTAGATTGTACGTCTCAAT----AGCT-GATTCTAT-ATCCCATTGATGAATTCCT 80436 |||| || ||||| ||||| || ||| ||| | | | |||| |||| || Sbjct 1097731 GACATGAGGTTGTATGTCTCGATGACACGCTCGATGTTGTCACCCCA--GATG----CCG 1097784 Query 80437 ACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAAC 80496 || || |||||||| | ||||||||| || | || || |||||| ||| | || | | Sbjct 1097785 ACGGCAACACGCATGATCATGTGCTGGGGACGCTCGACAATCTTGCCATTGAGCTTGAGC 1097844 Query 80497 AAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAA 80556 | ||| || || | || || || || || || | ||| ||||| || ||||| Sbjct 1097845 AGGTAGGAGCGCTCAAGGGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCACGGTCGTAG 1097904 Query 80557 ATAATAACCGAGTTGAGTTTATCCTT 80582 | ||| |||||| ||| | ||||| Sbjct 1097905 ACAATGGCCGAGTCGAGCTCGTCCTT 1097930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718268144579720