Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq43 122 1e-22 seq51 114 2e-20 >seq43 Length=2457951 Score = 122 bits (134), Expect = 1e-22 Identities = 424/653 (65%), Gaps = 18/653 (3%) Strand=Plus/Plus Query 72022 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGC 72081 || || ||||| ||||| || |||||||| || || | ||||| || | || | | Sbjct 1097287 ACACGCTTCATGAAGAGGTCGGGAATCCAGAGGGCCAGGAATAGGTCGCGGGCACGGACC 1097346 Query 72082 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 72141 ||||| || || ||||| || || |||||| | | | || | ||||| || Sbjct 1097347 TCCTCCTTGCCATGGTTCTTGCGGAGGTCAAGGAACTCGAAGACGTCGGCGTGCCAAGGC 1097406 Query 72142 TCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 72201 || | ||||||| | | | || || || ||||| || ||||| || | ||| | || Sbjct 1097407 TCGAGGTATATGCAGAAAGCACCGGGACGCTTGTTACCACCCTGGTCGACGTAGCGGGCC 1097466 Query 72202 GTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAG 72261 ||||| || || || | | ||| || | ||||||||||| | || ||||| |||| Sbjct 1097467 GTGTTGTTGTAGACACGTAGCATAGGGACGATACCATTGGAGGTGCCGTTGGTGCCGGCA 1097526 Query 72262 ATATAGCTTCCACTGGCACGAAT--ATTGCTAATTGATAGACCTATTCCCCCTGCCATTT 72319 || ||| || |||| || || || ||| || || || || || ||| | | Sbjct 1097527 ATGTAGGAGCCCGTGGCGCGGATGCGGTGGACGTTG--AGGCCGATGCCACCGGCCGTCT 1097584 Query 72320 TAGAGATTAATGCGCATCGT-TTTAACGTATCATAGATGCCCTCTATACTATCATCCATC 72378 | ||||| | || || ||| || | ||||| || ||||| || || || || ||| || Sbjct 1097585 TGGAGATCATGGCACA-CGTCTTGAGGGTATCGTATATGCCGTCAATGCTGTCCTCCTTC 1097643 Query 72379 ATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTA 72438 || | | || || || |||| ||| || || || || || || | ||| Sbjct 1097644 ATATCGACGAGGAAGCACGAGGACAGCTGGGCCTGAGGGGTACCGGCGTTGAAAAGGGTG 1097703 Query 72439 GGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAAT----AGCT-G 72493 ||||| ||||| || || || || | |||| || ||||| ||||| || ||| | Sbjct 1097704 GGAGATGCGTGGGTGAAGCACTTGTTGGACATGAGGTTGTATGTCTCGATGACACGCTCG 1097763 Query 72494 ATTCTAT-ATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTT 72552 || | | | |||| |||| || || || |||||||| | ||| ||||| || | Sbjct 1097764 ATGTTGTCACCCCA--GATG----CCGACGGCAACACGCATGATCATGTGCTGGGGACGC 1097817 Query 72553 TCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 72612 || || |||||| ||| | || | || |||||| || | || || || || || Sbjct 1097818 TCGACAATCTTGCCATTGAGCTTGAGCAGGTAGGAGCGCTCAAGGGTCTTGAAGCCGAAG 1097877 Query 72613 TAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTT 72665 || | ||| ||||| || ||||| | ||| |||| | ||| | ||||| Sbjct 1097878 TACTGGTAGTTGAAGTCACGGTCGTAGACAATGGCCGAGTCGAGCTCGTCCTT 1097930 >seq51 Length=1305468 Score = 114 bits (126), Expect = 2e-20 Identities = 364/561 (65%), Gaps = 14/561 (2%) Strand=Plus/Plus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 || || || ||| ||| |||||||| || | || | ||||| || || || || Sbjct 1212763 CAGGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAAGGTCAGA 1212822 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184 || ||||| || |||||||| || ||||| || || || ||||| | || |||||| Sbjct 1212823 CCTGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCCCCGCTGAAGAAG 1212882 Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCACTGTCATGT 42241 || || || || || |||||||| | ||| | || || | | | | ||| || Sbjct 1212883 ATGCCCTCGACAGCAGCAAAGGCGACAAGACGCTGGGCAAAGGTAGAGTTGCGGTCCTGG 1212942 Query 42242 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 42301 |||||| | |||||| ||||||||||| | ||||| || || || ||||| || Sbjct 1212943 ATCCACCTGATAGCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTCTCAATGGCGTTG 1213002 Query 42302 AAGAGATAGtttttttCATTACTA----TCTTTAACATATGTATCGATCAAAAGACTATA 42357 ||||| || | | | | | || || | || |||||||| | ||| || Sbjct 1213003 AAGAGGTA----TGTGCGCTGGGAGGGTTCCTTGATGTAGGTATCGATGAGGAGAGAGTA 1213058 Query 42358 CATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGT 42417 |||| || |||||||| || || ||||| || |||||||| || | |||||||| Sbjct 1213059 GGTTTCCGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGGGCCTCGGG 1213118 Query 42418 AACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGC 42477 | ||| || || || || || ||| | | || ||||| || || || ||| ||| Sbjct 1213119 GATCTGGACCTCGCCACTGAAACGCTCAACGAGGTTCTCGTTGACAATGCCATCAGAGGC 1213178 Query 42478 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC--CGGTG-TTAATTTATT 42534 || || || || | | || || || | || ||||| | || | || || Sbjct 1213179 AGCGAAGAAGGCAAGGATGTGAGAGATGAAGAACTTCTCGTCATCATTGATGCGGTTGTT 1213238 Query 42535 CCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGC 42594 ||| || | || || || || | || | || || | ||||| || || || || || Sbjct 1213239 CCAGTCGTGGAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAGAAAGAGGCCTCGGC 1213298 Query 42595 CTTTTTATACATATTCCAGAT 42615 ||| || ||||| | |||||| Sbjct 1213299 CTTCTTGTACATCTGCCAGAT 1213319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671138587585480