Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq51 255 9e-63 seq43 134 2e-26 >seq51 Length=1305468 Score = 255 bits (282), Expect = 9e-63 Identities = 576/852 (68%), Gaps = 39/852 (5%) Strand=Plus/Minus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| | |||||||| ||||| ||||||| || ||||| | ||| ||| | || ||| Sbjct 1213319 ATCTGGCAGATGTACAAGAAGGCCGAGGCCTCTTTCTGGACCGCCGAGGAGATTGACCTG 1213260 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTT----AT 125134 ||||||||||| |||| ||| | | || | | ||| ||| ||||| || || Sbjct 1213259 TCCAAGGACCTCCACGACTGGAACAACCGCATCAATGA---TGA-CGAGAAGTTCTTCAT 1213204 Query 125135 ATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT-GTTGA 125193 || ||||| | |||||||| || | ||| ||||| || |||||||| || || ||||| Sbjct 1213203 CTCTCACATCCTTGCCTTCTTCGCTGCCTCTGATGGCATTGTCAACGAGAACCTCGTTGA 1213144 Query 125194 CACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTGCTTTTACGGATTCCAAATCA 125253 || ||| | ||| | || || |||| ||||| ||||| ||||| |||| Sbjct 1213143 G-CGTTTCAGTGGCGAGGTCCAGATCCCCGAGGCCCGCTGCTTCTACGGTTTCCAGATCA 1213085 Query 125254 TGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATC 125313 |||| |||||| | |||||||||| |||||| || || || | ||||| || | Sbjct 1213084 TGATGGAGAACATTCACTCGGAAACCTACTCTCTCCTCATCGATACCTACATCAAGGAAC 1213025 Query 125314 CG---CAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAA 125370 | || || | | || ||||| ||||| || || || | || | || || || | Sbjct 1213024 CCTCCCAGCGCACATAC---CTCTTCAACGCCATTGAGACCATCCCTTGCATCCGCAAGA 1212968 Query 125371 AGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGG 125430 |||| | |||| || |||||||| | ||| ||| ||| | | ||| | | || | Sbjct 1212967 AGGCCGACTGGGCTATCAGGTGGATCCAGGACCGCAACTCTACCTTTGCCCAGCGTCTTG 1212908 Query 125431 TGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGC 125490 | || || || || || |||||||||||||| || ||||| ||||||| |||| Sbjct 1212907 TCGCCTTTGCTGCTGTCGAGGGCATCTTCTTCAGCGGGGCCTTTGCTTCCATCTTCTGGC 1212848 Query 125491 TCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACG 125550 |||||||||| || || ||||| || ||||| | ||||||| | || || || |||| Sbjct 1212847 TCAAGAAGCGTGGTCTGATGCCAGGTCTGACCTTCTCTAACGAGCTCATCTCGCGTGACG 1212788 Query 125551 AGGGCCTACACTGTGACTTTGCCATTCTACTG-TTTCGCAACT--ATCTGCG-TCCCGAG 125606 |||| || ||| ||||||||| || ||| ||||| || | | || || | Sbjct 1212787 AGGGTCTCCACACCGACTTTGCCTGCCTGCTGCACTCGCACCTCAAGCACCGCGCCAGCA 1212728 Query 125607 TGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCCGTGAGGATAGAACAA 125666 |||||| || | | |||| ||||| ||||||||||| || || | Sbjct 1212727 AGCAGAT-CATCCACGAAA---TCATC---------ACCGATGCCGTCGCCATTGAGAAG 1212681 Query 125667 GAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAATGTGC 125726 ||||| || || ||| | || || | || | |||||||| | || ||| Sbjct 1212680 GAGTTCCTCACAGAAGCTCTGCCCTGTGCCCTGCTCGGCATGAATGCCTCCCTGATGCAG 1212621 Query 125727 GAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC--CG-CAAGATT 125783 ||||||| |||||||| ||||| ||||||||| || | ||| || |||| | Sbjct 1212620 CAGTACATTGAGTTTGTCGCAGACCGTCTACTGGTCG---CCCTCGGCAACGACAAGGTC 1212564 Query 125784 TACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGGTAAGACCAAC 125843 |||||| | | || ||||| || |||||| | ||| || || | || ||||||||| Sbjct 1212563 TACAACTCGACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACCAAC 1212504 Query 125844 TTTTTCGAGAAG 125855 || ||||||||| Sbjct 1212503 TTCTTCGAGAAG 1212492 >seq43 Length=2457951 Score = 134 bits (148), Expect = 2e-26 Identities = 342/515 (66%), Gaps = 4/515 (1%) Strand=Plus/Minus Query 96807 ACAAACGGCAACGCCAGTGGCCTAGTGCCAATGCTCAGAATGTACAATGCAATGTCACGA 96866 || ||||||| | ||| ||| | || || ||||| | | ||||| | | | || Sbjct 1097519 ACCAACGGCACCTCCAATGGTATCGTCCCTATGCTACGTGTCTACAACAACACGGCCCGC 1097460 Query 96867 TACGTTACACAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGG 96926 ||||| ||||| || || || || || || ||| | | | ||| | || |||||| Sbjct 1097459 TACGTCGACCAGGGTGGTAACAAGCGTCCCGGTGCTTTCTGCATATACCTCGAGCCTTGG 1097400 Query 96927 CACGCGGACGTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGA 96986 ||||| ||||| || || || | || | ||||| ||| |||| || |||| || Sbjct 1097399 CACGCCGACGTCTTCGAGTTCCTTGACCTCCGCAAGAACCATGGCAAGGAGGAGGTCCGT 1097340 Query 96987 GCCAGGGACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGAC 97046 ||| | ||| | || || |||||| | || || | ||||||||||| || | | Sbjct 1097339 GCCCGCGACCTATTCCTGGCCCTCTGGATTCCCGACCTCTTCATGAAGCGTGTTGAGAAG 1097280 Query 97047 GGTGGCTACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGC 97106 ||| |||||| || ||||||||| | || ||||| ||| | || || ||| Sbjct 1097279 AACGGCGACTGGACGCTCATGTGCCCCAGCGAGTGCCCCGGCCTGGCTGACGTCTACGGC 1097220 Query 97107 GAAGAGTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGT 97165 || || || |||||| |||| | |||||| | ||||| || || |||||| | Sbjct 1097219 GAGGAATTCGAGGCCCTGTACGAGAAGTACGAGAAGGAGGGTCGCGGCCGCAAGACGA-T 1097161 Query 97166 CGATGCACGAGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGT 97224 | || | |||| || ||| | ||||| | ||||||| |||||||| | || | Sbjct 1097160 CCGCGCTC-AGAAGCTTTGGTACTCCATCCTTGAGGCTCAGACCGAGACTGGTAACCCAT 1097102 Query 97225 ACATTCTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCA 97284 || ||||||||||| | || ||||| |||||||| || |||| |||||| Sbjct 1097101 TTATGCTCTACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGTACCATCC 1097042 Query 97285 AGGGCTCCAATCTGTGCACGGAAATTGTAGAGTAC 97319 |||| || || ||||| || ||||| |||||| Sbjct 1097041 GCAGCTCGAACCTCTGCACCGAGATTGTTGAGTAC 1097007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741058523783480