Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq51 145 1e-30 seq33 84.2 3e-12 >seq51 Length=1305468 Score = 145 bits (160), Expect = 1e-30 Identities = 195/269 (72%), Gaps = 2/269 (1%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCAGATCTCTTCGAG-ATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| | |||| || | ||||| || || ||||||||||| |||| Sbjct 597266 CGCCAAGCGTCACCGCA-AGATCTTGAAGGACAACATTCAGGGCATCACCAAGCCTGCTA 597208 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| |||||||| |||||||| || ||||||||| |||| | || |||| || |||| Sbjct 597207 TCCGCCGTCTGGCCCGTCGTGGCGGTGTCAAGCGTATCTCGGCCATGATCTACGAGGAGA 597148 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || ||| | |||| ||||||| || || |||| || || || ||| |||| Sbjct 597147 CGCGCAGCGTTCTCAAGACCTTCCTCGAGGGTGTCATCCGCGACGCCGTCACCTACACCG 597088 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || || ||||| ||||| || | || |||| || || | || || || | Sbjct 597087 AGCACGCCAAGCGCAAGACGGTCACGTCTCTCGACGTCGTGTACGCTCTCAAGCGCCAGG 597028 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| | | || ||||| || ||||| Sbjct 597027 GCCGCACCCTCTACGGTTTCGGTGGTTAA 596999 >seq33 Length=842655 Score = 84.2 bits (92), Expect = 3e-12 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519 || |||||||| || |||||||| || |||||||||||||| || ||||||||||| ||| Sbjct 386781 GACAACATCCAGGGTATCACCAAACCCGCTATCCGTCGTCTTGCGCGTCGTGGTGGCGTC 386840 Query 16520 AAGCGT 16525 |||||| Sbjct 386841 AAGCGT 386846 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075133255589