Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq51 140 4e-28 >seq51 Length=1305468 Score = 140 bits (154), Expect = 4e-28 Identities = 370/563 (66%), Gaps = 18/563 (3%) Strand=Plus/Plus Query 33304 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 33363 || || || ||| ||| ||||||||||| | || || ||||| || || || || Sbjct 1212763 CAGGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAAGGTCAGA 1212822 Query 33364 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAG 33423 || ||||| || |||||||| || ||||| || |||||||| || | || |||||| Sbjct 1212823 CCTGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCCCCGCTGAAGAAG 1212882 Query 33424 ATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGT 33480 || || || || ||||||||||| | ||| | || || | | | || ||| || Sbjct 1212883 ATGCCCTCGACAGCAGCAAAGGCGACAAGACGCTGGGCAAAGGTAGAGTTGCGGTCCTGG 1212942 Query 33481 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 33540 |||||| | |||||| ||||||||||| | ||||| || || || ||||| || Sbjct 1212943 ATCCACCTGATAGCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTCTCAATGGCGTTG 1213002 Query 33541 AAGAGATAGtttttttCATTACTA----TCTTTAACATAAGTATCGATCAAAAGACTATA 33596 ||||| || | | | | | || || | || |||||||| | ||| || Sbjct 1213003 AAGAGGTA----TGTGCGCTGGGAGGGTTCCTTGATGTAGGTATCGATGAGGAGAGAGTA 1213058 Query 33597 CATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGT 33656 ||||||| |||||||| || || ||||| || |||||||| || | ||||||| Sbjct 1213059 GGTTTCCGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGGGCCTCGGG 1213118 Query 33657 AATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGC 33716 ||||| || || || || || || | | || || || || || || ||| ||| Sbjct 1213119 GATCTGGACCTCGCCACTGAAACGCTCAACGAGGTTCTCGTTGACAATGCCATCAGAGGC 1213178 Query 33717 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC-----TGGTGTTAGTTTA 33771 || || || || | | || || || | || ||||| || || | || Sbjct 1213179 AGCGAAGAAGGCAAGGATGTGAGAGATGAAGAACTTCTCGTCATCATTGATG--CGGTTG 1213236 Query 33772 TTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCT 33831 ||||| || | || || || || | || | || || | ||||| || || ||||| Sbjct 1213237 TTCCAGTCGTGGAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAGAAAGAGGCCTCG 1213296 Query 33832 GCCTTTTTATACATGTTCCAGAT 33854 ||||| || ||||| | |||||| Sbjct 1213297 GCCTTCTTGTACATCTGCCAGAT 1213319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622946631560680