Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq43 316 5e-81 >seq43 Length=2457951 Score = 316 bits (350), Expect = 5e-81 Identities = 1054/1624 (65%), Gaps = 22/1624 (1%) Strand=Plus/Minus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 ||||| ||||| | || || | | ||| || || || | | | | ||| |||| || Sbjct 1097720 TTCACCCACGCATCTCCCACCCTTTTCAACGCCGGTACCCCTCAGGCCCAGCTGTCCTCG 1097661 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 ||||| || | | |||||||| || ||| || || || | || || || |||| Sbjct 1097660 TGCTTCCTCGTCGATATGAAGGAGGACAGCATTGACGGCATATACGATACCCTCAAGACG 1097601 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTGC 363725 ||||| | || ||||||| || || || || || | | || ||||| | || || Sbjct 1097600 TGTGCCATGATCTCCAAGACGGCCGGTGGCATCGGCCTCAACG-TCCACCGCATCCGCGC 1097542 Query 363726 ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCG 363785 | | |||||| |||||| || ||| ||||| | || || ||||| || Sbjct 1097541 CACGGGCTCCTACATTGCCGGCACCAACGGCACCTCCAATGGTATCGTCCCTATGCTACG 1097482 Query 363786 TGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTT 363845 ||| | |||| || || | ||||||||||||||||| ||||| || || || Sbjct 1097481 TGTCTACAACAACACGGCCCGCTACGTCGACCAGGGTGGTAACAAGCGTCCCGGTGCTTT 1097422 Query 363846 -TGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904 ||| || || ||||||||| || ||||| | || ||||| ||||| ||||| || | Sbjct 1097421 CTGC-ATATACCTCGAGCCTTGGCACGCCGACGTCTTCGAGTTCCTTGACCTCCGCAAGA 1097363 Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964 || || || ||||| | ||||| || || || ||| || || ||| || | |||| Sbjct 1097362 ACCATGGCAAGGAGGAGGTCCGTGCCCGCGACCTATTCCTGGCCCTCTGGATTCCCGACC 1097303 Query 363965 ATTTTATGAAGCGCGTGGAGGCAGGTAAG--AATTGGTCACTCTTTTGCCCACACGAATG 364022 || |||||||| || ||| | | | | | ||| | ||| | ||||| ||| || Sbjct 1097302 TCTTCATGAAGCGTGTTGAG--AAGAACGGCGACTGGACGCTCATGTGCCCCAGCGAGTG 1097245 Query 364023 TCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATC 364082 || || || | || || | || || || | | || || ||||| ||||| || Sbjct 1097244 CCCCGGCCTGGCTGACGTCTACGGCGAGGAATTCGAGGCCCTGTACGAGAAGTACGAGAA 1097185 Query 364083 GGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTC 364142 |||||| | || ||||| || | ||| |||||||| |||| ||||| | || | Sbjct 1097184 GGAGGGTCGCGGCCGCAAGACGATCCGCGCTCAGAAGCTTTGGTACTCCATCCTTGAGGC 1097125 Query 364143 GCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAA 364202 |||| ||||| || | || | |||| | ||||| || |||||||||||| ||| Sbjct 1097124 TCAGACCGAGACTGGTAACCCATTTATGCTCTACAAGGACCACTGCAACCGCAAGAGCAA 1097065 Query 364203 CCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATACA 364261 |||| || |||| ||||| | || |||| | ||||| || ||||||||| |||| ||| Sbjct 1097064 CCAGAAGAACCTGGGTACCA-TCCGCAGCTCGAACCTCTGCACCGAGATTGTTGAGTACT 1097006 Query 364262 CCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA 364321 | || ||||| || ||||| || ||||| || || | || || ||||| ||||| Sbjct 1097005 CGGCCCCCGATGAAGTCGCCGTCTGCAACCTGGCCTCTCTGGCCCTGCCGGCCTTTGTCG 1096946 Query 364322 AAGATGGTA----CT--TTTGACCACCAGCATCTTTATGACGTAA--CCTATCATGCTAC 364373 | | | | || | ||| | | | || | || || | | | || | | | Sbjct 1096945 ACTACGACAACGCCTGCTACGACTTCAACAAGCTGCACGAGGTGACGCGTGTCGTCGTCC 1096886 Query 364374 TTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTC 364433 |||| ||| ||| | | || ||| || || || || | || ||| Sbjct 1096885 --GCAACCTCAACAGGATCATTGACGTCAACTACTACCCCGTCGAGGAGGCCCGCAACAG 1096828 Query 364434 TAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGAT 364493 || ||||| || ||||| ||||| || ||| | ||||| ||||| |||| || || Sbjct 1096827 CAACATGCGCCACCGCCCCATTGGCCTCGGTATCCAGGGTCTCGCCGACGCCTTCCTGGC 1096768 Query 364494 GCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAAC 364553 || ||| | ||||| ||||| || || ||| || || | |||||||||| || Sbjct 1096767 TCTGCGCATGCCCTTTGAGTCGCCCGAGGCCCGTCAGCTGAACCTGCAGATCTTTGAGAC 1096708 Query 364554 AATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTC 364613 || || ||||| |||| | ||| || |||| || |||| ||| Sbjct 1096707 CATCTACCACGCCGCCGTGACGGAGTCGGTGGAGCTGGCGAAGCAGGAGGGCCCCTACCA 1096648 Query 364614 TACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCAC 364673 || | |||| || || || |||| | | ||||| || | ||| | |||| Sbjct 1096647 GACCTTCCAGGGCTCGCCCGCCTCCAAGGGTATCCTGCAGTTCGACATGTGGGACGTCAA 1096588 Query 364674 GCCATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGGTACTC 364732 ||| || | || ||| | ||||| |||| | | | | || ||| |||| || || | Sbjct 1096587 GCCCTCGGACCTGTGGGAGTGGGAGTCGCTCAAGGAGC-AGGTCAAGGAGCACGGCACGC 1096529 Query 364733 GCAACTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACA 364792 ||||||| || || || |||||||||||||| || | |||||||| || |||| Sbjct 1096528 GCAACTCTCTACTTGTGGCCCCCATGCCCACGGCCAGCACGTCGCAGATCCTGGGCAACA 1096469 Query 364793 ACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAAT 364852 | ||||||||||| || | || ||| | || || ||||| || || |||| || | Sbjct 1096468 ATGAGTGCTTCGAGCCCTACACGTCCAACATCTACTCGCGCCGTGTCCTGGCCGGCGAGT 1096409 Query 364853 TTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACA 364912 | | ||| || || | || ||||||| || ||| | ||| |||||| ||| Sbjct 1096408 TCCAGGTTGTCAACCCCTGGCTGCTCAAGGACCTGGTCGAGCTCGGCCTGTGGTCCGACG 1096349 Query 364913 GCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAG 364972 |||||||||| || || || | || || || | |||||||| || | || | Sbjct 1096348 CCATGAAGAACCGCATTATTGCTGAAAACGGCTCGATCCAGAACATCCCCAACATCCCCG 1096289 Query 364973 AAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATA 365032 | ||| | ||| | | ||||| || |||||||| |||||| ||| || | | | Sbjct 1096288 ACGATGTCAAGGCCCTGTACAAGACGGTATGGGAGATTTCCCAGCGCCACGTCGTGCAGA 1096229 Query 365033 TGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTC 365092 |||| ||||| || ||||| |||||| |||| ||||| | ||| | ||||| Sbjct 1096228 TGGCTGCCGACCGTGGTGCCTTTATCGATCAGTCGCAGTCTCTCAACATCCACATGAAGG 1096169 Query 365093 AGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGA 365152 | || ||| | |||| |||| |||||| || ||||||||| ||||| |||| Sbjct 1096168 ACCCCACCATGGGCAAGATTACCAGCATGCACTTTGCCGGGTGGAAGCTGGGTCTCAAGA 1096109 Query 365153 CAGG 365156 | || Sbjct 1096108 CGGG 1096105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352380957086