Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq43 93.3 3e-14 seq46 82.4 6e-11 >seq43 Length=2457951 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || ||||||||||| || |||||||||||| || ||| | | ||| Sbjct 2352944 AGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 2352885 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || ||||| ||| | || || ||||| |||||| || | |||||| ||||| Sbjct 2352884 TCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 2352825 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | ||| || | | | | |||||| | |||| || | |||||| || Sbjct 2352824 TGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTC 2352765 Query 16904 TTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 || || || || || ||||| || |||||||| ||| Sbjct 2352764 TTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTTG 2352729 Score = 86.0 bits (94), Expect = 5e-12 Identities = 107/146 (73%), Gaps = 3/146 (2%) Strand=Plus/Minus Query 16700 CGCATTTAC---CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATG 16756 ||||||||| || || || || | || |||| ||||| ||| |||||| || ||| Sbjct 65875 CGCATTTACTGGCCGCCACGGAGACGGAGGACCAAGTGCAGGGTGCTCTCCTTCTGGATG 65816 Query 16757 TTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGT 16816 |||||||||| || ||| ||||||||| || || || ||| | ||||| ||||| Sbjct 65815 TTGTAGTCGGACAGGGTGCGACCGTCCTCCAGCTGCTTACCAGCAAAGATAAGACGCTGC 65756 Query 16817 TGGTCCACAGGCACGCCCTCTTTGTC 16842 ||||| ||| | |||||| ||||| Sbjct 65755 TGGTCGGGAGGGATGCCCTCCTTGTC 65730 >seq46 Length=2353920 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||||| || |||||||| || ||||||||||||| || ||| | ||||| Sbjct 1617594 AGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCC 1617653 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCG 16843 || | || || || || | || || || || |||||| ||| | |||||||||||| Sbjct 1617654 TCAAGCTGCTTTCCAGCGAAGATCAGGCGTTGCTGGTCCGGAGGGATGCCCTCTTTGTCC 1617713 Query 16844 GCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTT 16903 || | ||| || | | | | |||||| | ||| || | ||||||||| Sbjct 1617714 TGGATCTTGGACTTGACATTGTCAATAGTGTCCGAAGACTCGACCTCAAGGGTGATGGTC 1617773 Query 16904 TTTCCGGTCAGCGTTTTGACAAA 16926 || || ||||| || || || || Sbjct 1617774 TTGCCCGTCAGGGTCTTCACGAA 1617796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087639598270