Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq51 122 1e-22 seq43 118 1e-21 >seq51 Length=1305468 Score = 122 bits (134), Expect = 1e-22 Identities = 366/563 (65%), Gaps = 18/563 (3%) Strand=Plus/Plus Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720 || || || ||| ||| ||||||||||| | || | ||||| || || || || Sbjct 1212763 CAGGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAAGGTCAGA 1212822 Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780 || ||||| || |||||||| || ||||| || ||||| ||||| | || ||||| Sbjct 1212823 CCTGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCCCCGCTGAAGAAG 1212882 Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGT 32837 || || || || || |||||||| | ||| | || || | | | || ||| || Sbjct 1212883 ATGCCCTCGACAGCAGCAAAGGCGACAAGACGCTGGGCAAAGGTAGAGTTGCGGTCCTGG 1212942 Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTA 32897 |||||| | |||||| ||||||||||| | ||||| || ||||| || || || Sbjct 1212943 ATCCACCTGATAGCCCAGTCGGCCTTCTTGCGGATGCAAGGGATGGTCTCAATGGCGTTG 1213002 Query 32898 AAGAGATAGtttttttCATTACTA----TCTTTAACATATGTATCAATCAAAAGACTATA 32953 ||||| || | | | | | || || | || ||||| || | ||| || Sbjct 1213003 AAGAGGTA----TGTGCGCTGGGAGGGTTCCTTGATGTAGGTATCGATGAGGAGAGAGTA 1213058 Query 32954 CATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGT 33013 ||||||| |||||||| || || || || || ||||||||||| | ||||||| Sbjct 1213059 GGTTTCCGAGTGAATGTTCTCCATCATGATCTGGAAACCGTAGAAGCAGCGGGCCTCGGG 1213118 Query 33014 AATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGC 33073 ||||| || || || || || || | | || || || || || || ||| ||| Sbjct 1213119 GATCTGGACCTCGCCACTGAAACGCTCAACGAGGTTCTCGTTGACAATGCCATCAGAGGC 1213178 Query 33074 TGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC-----TGGTGTTAGTTTA 33128 || || || || | | || || || | || ||||| || || | || Sbjct 1213179 AGCGAAGAAGGCAAGGATGTGAGAGATGAAGAACTTCTCGTCATCATTGATG--CGGTTG 1213236 Query 33129 TTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCT 33188 ||||| || | || || || || | || | || || | ||||| || || ||||| Sbjct 1213237 TTCCAGTCGTGGAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAGAAAGAGGCCTCG 1213296 Query 33189 GCCTTTTTATACATATTCCAGAT 33211 ||||| || ||||| | |||||| Sbjct 1213297 GCCTTCTTGTACATCTGCCAGAT 1213319 >seq43 Length=2457951 Score = 118 bits (130), Expect = 1e-21 Identities = 443/686 (65%), Gaps = 18/686 (3%) Strand=Plus/Plus Query 63038 GGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATC 63097 || ||||| | || ||| || |||| | || || || ||||| ||||| || |||||| Sbjct 1097254 GGGCACATGAGCGTCCAGTCGCCGTTCTTCTCAACACGCTTCATGAAGAGGTCGGGAATC 1097313 Query 63098 CAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGA 63157 || || || | ||||| || | || | ||||| || || ||||| || Sbjct 1097314 CAGAGGGCCAGGAATAGGTCGCGGGCACGGACCTCCTCCTTGCCATGGTTCTTGCGGAGG 1097373 Query 63158 TCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGC 63217 || |||||| | | | || | ||||| || || | ||||||| | | | || || Sbjct 1097374 TCAAGGAACTCGAAGACGTCGGCGTGCCAAGGCTCGAGGTATATGCAGAAAGCACCGGGA 1097433 Query 63218 CGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGA 63277 || ||||| || ||||| || | ||| | || ||||| || || || | | ||| || Sbjct 1097434 CGCTTGTTACCACCCTGGTCGACGTAGCGGGCCGTGTTGTTGTAGACACGTAGCATAGGG 1097493 Query 63278 ATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAAT--AT 63335 | ||||||||||| || || ||||| || | || ||| || |||| || || Sbjct 1097494 ACGATACCATTGGAGGTGCCGTTGGTGCCGGCAATGTAGGAGCCCGTGGCGCGGATGCGG 1097553 Query 63336 TACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGT-TTTAAC 63394 | ||| || || || || || ||| | || ||||| | || || ||| || | Sbjct 1097554 TGGACGTTG--AGGCCGATGCCACCGGCCGTCTTGGAGATCATGGCACA-CGTCTTGAGG 1097610 Query 63395 GTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATT 63454 ||||| || ||||| || || || || ||| |||| | | || || || |||| Sbjct 1097611 GTATCGTATATGCCGTCAATGCTGTCCTCCTTCATATCGACGAGGAAGCACGAGGACAGC 1097670 Query 63455 TGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCA 63514 ||| || || || || || || | ||| ||||| ||||| || || || || | Sbjct 1097671 TGGGCCTGAGGGGTACCGGCGTTGAAAAGGGTGGGAGATGCGTGGGTGAAGCACTTGTTG 1097730 Query 63515 GAAAGTAGATTGTACGTCTCAAT----AGCT-GA-GTCTATATCCCATTGATGAATTCCT 63568 || | || ||||| ||||| || ||| || || | |||| |||| || Sbjct 1097731 GACATGAGGTTGTATGTCTCGATGACACGCTCGATGTTGTCACCCCA--GATG----CCG 1097784 Query 63569 ACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAAC 63628 || || |||||||| | ||||||||| || | || || |||||| || | || | | Sbjct 1097785 ACGGCAACACGCATGATCATGTGCTGGGGACGCTCGACAATCTTGCCATTGAGCTTGAGC 1097844 Query 63629 AAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAA 63688 | |||||| || | || || || || || || | ||| ||||| || ||||| Sbjct 1097845 AGGTAGGAGCGCTCAAGGGTCTTGAAGCCGAAGTACTGGTAGTTGAAGTCACGGTCGTAG 1097904 Query 63689 ATAATAACCGAGTTGAGTTTATCCTT 63714 | ||| |||||| ||| | ||||| Sbjct 1097905 ACAATGGCCGAGTCGAGCTCGTCCTT 1097930 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631421810800