Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq55 123 5e-23 seq51 111 3e-19 seq46 109 1e-18 >seq55 Length=1743480 Score = 123 bits (136), Expect = 5e-23 Identities = 442/683 (65%), Gaps = 31/683 (5%) Strand=Plus/Plus Query 279692 GCCAGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCT 279751 ||| || || || ||||| || || |||||||||||||||||||| | |||||||| || Sbjct 571431 GCCCGTCGGCTCCCTGTCCGGCGGATGGAAGATGAAGCTGGCCCTGGCCCGCGCCATGCT 571490 Query 279752 ACTGCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGT 279811 | ||| ||||| ||||| ||||| || ||||| ||||||||| ||||| ||||||| Sbjct 571491 CCAGCGCGCCGACGTCCTCCTGCTGGACGAGCCTACCAACCACCTGGACGTTGCCAACGT 571550 Query 279812 AGCCTGGCTAGTGTCCTACCTAACCAGTCTGAAGA---ATGTTTCTTCCCTCATTGTCTC 279868 || ||||| | | |||||| | || | | | | | | | ||| || || || Sbjct 571551 GGCTTGGCTGGAGAACTACCT--CAAGGC-GCACACCGACATCACCAGCCTGATCGTGTC 571607 Query 279869 TCACGACTCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCT 279928 |||||||| |||||||| || ||| | | |||| ||||| ||| || Sbjct 571608 CCACGACTCCGGCTTCCTGGACAACGTCACGACGGACATCTACCACTACGAGGCTAACAA 571667 Query 279929 GAAGCTCTCCAAGCACATCGGCAACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGCGGC 279988 ||||||| | ||| ||||||||||| || || | ||||| ||||| Sbjct 571668 GAAGCTCGCGTGCTACAAGGGCAACCTGTCCAAGTTTGTCGAGGTCCGCCCCGAGGCCAA 571727 Query 279989 CGCCTACTATGACCTGAAGGACGCCACCGCCAAGTGGGAATTCCCTGAGCCAGGGTTTCT 280048 |||||| |||| | |||| ||| ||| | || || || || | || Sbjct 571728 GAGCTACTACACCCTGTCCGCGGCCAATGCCCAGTTCAAGTTTCCCCCTCCCGGCATCCT 571787 Query 280049 GGAGGGCATCACATCAAAGGATCGCGCAATCATGAAGCTCCGTGGCGTCTCCTTTG---- 280104 | |||||||| || || ||||| ||||| | | || || ||| | Sbjct 571788 GACGGGCATCAAGTCGCAGACGCGCGCCATCAT----CCGCATGTCGAACGCTTCGTACA 571843 Query 280105 CTTATCCCAATGGCCCCAACATCTTCAGCAGT-----GTCAACTCGCAGGTTTCTATGAA 280159 | || ||||| ||| || | | || || || ||| || ||| | || Sbjct 571844 CGTACCCCAA-GGCGCCTAAGCCGTC-GCTGTCGGACGTCTCCTGCCAGCTCAGCCTGTC 571901 Query 280160 CTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCT 280219 || || | | |||| || ||||| || || || ||||| ||||| ||||| | || Sbjct 571902 GTCTCGCGTCGCCATCATCGGCCCCAACGGCGCCGGCAAGTCGACCCTCATCAAGATGCT 571961 Query 280220 GACTGGCGAG-----ACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGG 280274 || |||||| ||||| |||| | || || |||||| |||||| |||| Sbjct 571962 CACGGGCGAGGTCATACCCA--CCACCGGCAGG---GTCGAGAAGCACCCCAACCTGCGC 572016 Query 280275 ATGGCTTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCT 280334 || | ||| || ||||||||| || | ||| | |||| ||||| || | ||| || Sbjct 572017 ATCGGCTACATCAAGCAGCACGCTCTCGAGCACGTGGAGATGCACCTCGAGAAGACGCCC 572076 Query 280335 AACCAATACATTCAGTGGCGCTA 280357 ||||| ||| | ||||||||||| Sbjct 572077 AACCAGTACCTCCAGTGGCGCTA 572099 >seq51 Length=1305468 Score = 111 bits (122), Expect = 3e-19 Identities = 311/473 (66%), Gaps = 12/473 (3%) Strand=Plus/Plus Query 251524 TTCATCACACCTGGACGT-TGATATTCAGATACACGGCGTTCGAAGAAATTAGACTTGCC 251582 ||||| ||||| || | | || || |||| ||||| |||||||| || | |||||| Sbjct 1212457 TTCATGACACC-GGCCTTCTGGTAGTCAGCAACACGCTTCTCGAAGAAGTTGGTCTTGCC 1212515 Query 251583 CTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTGGCATTGTACTGCTTGGGATG 251642 |||| ||||| ||||||||||||||||||||| || | ||||| |||| | Sbjct 1212516 ACCCAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTCGAGTTGTAGACCTTGTCGTT 1212575 Query 251643 GCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGATACTGTCCCATCAGTTCAGA 251702 ||| || || || | | |||||||| |||||||| | ||||| |||||| | Sbjct 1212576 GCCGAGGGCGACCAGTAGACGGTCTGCGACAAACTCAATGTACTGCTGCATCAGGGAGGC 1212635 Query 251703 GTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATGAATTCCTTTTCGTTGGCAAC 251762 |||||||| | || ||| || | || || || ||| ||||| || |||| || Sbjct 1212636 ATTCATGCCGAGCAGGGCACAGGGCAGAGCTTCTGTGAGGAACTCCTTCTCAATGGCGAC 1212695 Query 251763 TGCCTCCTCCACAATTGCCT---TCACCTG--TGCCAGAGACAGCTTGTTCTCCAGCTTT 251817 || || | ||| | | | | ||| ||| | | || || || | Sbjct 1212696 GGCATCGGTGATGATTTCGTGGATGATCTGCTTGCTGGCG-----CGGTGCTTGAGGTGC 1212750 Query 251818 GAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGTCGCGACTGATGAACTCGTTG 251877 |||| ||| || | |||| | ||| ||||||||||| || ||||| |||||| Sbjct 1212751 GAGTGCAGCAGGCAGGCAAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTA 1212810 Query 251878 GACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCCAGAAGATTGCGCAAAAGGAT 251937 || | ||| || ||||||| ||||| ||| ||||||||||||| | ||||| Sbjct 1212811 GAGAAGGTCAGACCTGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAAGCAAAGGCC 1212870 Query 251938 CCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAAGGCGCTCAGCAAA 251990 || ||| | | ||||||||| | | || ||||| |||| ||||| Sbjct 1212871 CCGCTGAAGAAGATGCCCTCGACAGCAGCAAAGGCGACAAGACGCTGGGCAAA 1212923 >seq46 Length=2353920 Score = 109 bits (120), Expect = 1e-18 Identities = 159/222 (72%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||||||||| |||| ||||| ||||| || || | ||||| ||||| ||| Sbjct 2001212 GGTGAGGATCTGTGCAACTGCACCTTCTCCCTCGCCTACGGCGCCAAGATCCTGCTCAAC 2001153 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 |||| |||| | ||||||||||| | || || ||||| ||||||||| || | Sbjct 2001152 CAGACCCACCTCCGCCTCAAGCGTGGCCAGCGCTACGGTCTTTGCGGTCCCAACGGTTCC 2001093 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| || || ||||| ||||| |||| ||| | | ||| ||||| | ||| Sbjct 2001092 GGAAAGTCTACCCTCATGCGTGCCATCAACAACGAGCAGGTCG-AGGGTTTCCCCAAGCA 2001034 Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 || ||||| | ||| || | || ||||||||| | ||||| Sbjct 2001033 GTCCGAGGTCAAGACCGTCTTCGTCGAGCACGACCTTGACTC 2000992 Score = 93.3 bits (102), Expect = 9e-14 Identities = 103/135 (76%), Gaps = 2/135 (1%) Strand=Plus/Minus Query 280704 CACTCTCGCATTCGCGGTCTTTCTGGAGGCCAGAAGGTCAAACTTGTCATCGGAGCA-GC 280762 ||||| ||||| |||||||| || || |||||| ||||| |||| ||| || || Sbjct 1999808 CACTCGCGCATGCGCGGTCTCTCCGGTGGCCAGCGTGTCAAGACTGTCCTCGCCGCCTGC 1999749 Query 280763 TCTGTGGCAACACCCTCACGTGATCGTTCTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 || |||||| | ||| ||| |||| || || ||||||||||||||||| || ||||| || Sbjct 1999748 TC-GTGGCAGCGCCCCCACCTGATTGTCCTTGACGAGCCTACCAACTACCTTGACCGTGA 1999690 Query 280823 GAGCCTGGGCGCTCT 280837 |||||| || || Sbjct 1999689 CTCCCTGGGTGCCCT 1999675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027835838651393