Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq43 107 5e-18 seq46 100 7e-16 seq51 86.0 1e-11 >seq43 Length=2457951 Score = 107 bits (118), Expect = 5e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || || | ||| || || ||||| || |||||| Sbjct 2352959 CCACCACGGAGACGGAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTC 2352900 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || || |||||||| ||||| || ||| Sbjct 2352899 AGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGG 2352840 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || ||||| || || | ||| || || || Sbjct 2352839 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACC 2352780 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||| |||||||| || || ||||||||||| |||||||| Sbjct 2352779 TCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 2352733 >seq46 Length=2353920 Score = 100 bits (110), Expect = 7e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || || | || || || ||||| || ||||||| Sbjct 1617579 CCACCACGGAGGCGGAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 1617638 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || ||||| ||||||||||| || || || ||| Sbjct 1617639 AGGGTGCGGCCGTCCTCAAGCTGCTTTCCAGCGAAGATCAGGCGTTGCTGGTCCGGAGGG 1617698 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || ||||| |||||||| || | || || || || |||| || || || || Sbjct 1617699 ATGCCCTCTTTGTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCCGAAGACTCGACC 1617758 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || || ||||| ||||| || ||||| ||||| ||||| Sbjct 1617759 TCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 1617796 >seq51 Length=1305468 Score = 86.0 bits (94), Expect = 1e-11 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 269113 GAAAAAGAGTTCATTTGTGACGCTATCCCATGTTCTATGATCGGTATGAATGCCGATCTC 269172 || || |||||| | || ||| | || ||| | || |||| ||||||||| || Sbjct 1212686 GAGAAGGAGTTCCTCACAGAAGCTCTGCCCTGTGCCCTGCTCGGCATGAATGCCTCCCTG 1212627 Query 269173 ATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTCACGGCACTCGGTTATGAGAAA 269232 ||| | || || || || || || || || ||| | | || ||||| | || || Sbjct 1212626 ATGCAGCAGTACATTGAGTTTGTCGCAGACCGTCTACTGGTCGCCCTCGGCAACGACAAG 1212567 Query 269233 GTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTAATTTCGCTCGAAGGAAAGACG 269292 || ||||| |||| || ||||||| ||| ||||| || || || | || ||||| Sbjct 1212566 GTCTACAACTCGACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGTGGCAAGACC 1212507 Query 269293 AACTTCTTCGAAAAGCGTGTCAGCGACTATCA-ACGTCCTGGTGTAATGAA 269342 ||||||||||| |||||||| ||||| || | | || ||||| ||||| Sbjct 1212506 AACTTCTTCGAGAAGCGTGTTGCTGACTACCAGAAGGCC-GGTGTCATGAA 1212457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179653296654494