Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq43 223 3e-53 seq51 118 1e-21 >seq43 Length=2457951 Score = 223 bits (246), Expect = 3e-53 Identities = 945/1457 (65%), Gaps = 63/1457 (4%) Strand=Plus/Plus Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087 ||||||| || || |||||||| |||| || || | | | || | ||| ||| | | Sbjct 1096394 GGTTGACAACCTGGAACTCGCCGGCCAGGACACGGCGCGAGTAGATGTTGGACGTGTAGG 1096453 Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147 | || ||| | || || ||||| || || || | |||| | || || |||||| |||| Sbjct 1096454 GCTCGAAGCACTCATTGTTGCCCAGGATCTGCGACGTGCTGGCCGTGGGCATGGGGGCCA 1096513 Query 153148 CCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCCC 153207 | | | ||| || ||| ||||||| | | | ||||| | || || ||| |||| Sbjct 1096514 CAAGTAGAGAGTTGCGCGTGCCGTGCTCCTTGACCTGCTCCTTGAGCGACTCCCACTCCC 1096573 Query 153208 ACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTA--ACACTCCTCGACTGGCGGG 153265 |||| |||| || | ||| |||||||||| |||| | | || | | || |||||| Sbjct 1096574 ACAGGTCCGAGGGCTTGACGTCCCACATGTCGAACTGCAGGATACCCTTGGA--GGCGGG 1096631 Query 153266 ACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAG-CCTCGA 153324 ||| || || |||| ||| || | | ||||| || || | | || | Sbjct 1096632 CGAGCCCTGGAAGGTCTGGTAGGGGCCCTCCTGCTTCGCCAGCTC-CACCGACTCCGTCA 1096690 Query 153325 GCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGA--ACGGCCGCTTCTTCGCT 153382 ||| | | ||| ||||| || ||| || || || |||| | || || Sbjct 1096691 CGGCGGCGTGGTAGATGGTCTCAAAGATCTGCAGGTTCAGCTGACGGGC-CTCGGGCGA- 1096748 Query 153383 CTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGAT 153442 ||| | ||||||||||| || ||||||||||| |||||||||||||||| ||| || Sbjct 1096749 CTCAAAGGGCATGCGCAGAGCCAGGAAGGCGTCGGCGAGACCCTGGATACCGAGGCCAAT 1096808 Query 153443 GGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGAT 153502 ||| || || | ||||||| | || | | | ||| |||| ||| || || Sbjct 1096809 GGGGCGGTGGCGCATGTTGCTGTTGCGGGCCTCCTCGACGGGGTAGTAGTTGACGTCAAT 1096868 Query 153503 AATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATA 153562 || ||||||||||||| || || || || | | | | || || | ||| || || Sbjct 1096869 GATCCTGTTGAGGTTGCGGACGACGACACGCGTCACCTCGTGCAGCTTGTTGAAGTCGTA 1096928 Query 153563 G--GTCATT-TCGTCGACG-CGTACGCATCGATTCACGGCAATAGACGCCAGATTACAGA 153618 | | | || |||| | || | | || || || ||| | ||| ||||| || |||| Sbjct 1096929 GCAGGCGTTGTCGTAGTCGACAAAGGC--CGG--CAGGGCCAGAGAGGCCAGGTTGCAGA 1096984 Query 153619 CGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTT---GCTGCATT 153675 |||| || |||| | | ||||| || ||||||| ||||||||| ||||| Sbjct 1096985 CGGCGACTTCATCGGGGGCCGAGTACTCAACAATCTCGGTGCAGAGGTTCGAGCTGCGG- 1097043 Query 153676 TTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGT 153735 ||| |||| || | ||| ||||| ||||| ||||| ||| ||| ||||||| Sbjct 1097044 --ATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATAA 1097101 Query 153736 ACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAA---CCTATGCAGGTCCTGCGCTC 153792 | || || |||||| || | || | ||| | || | || | ||| || | Sbjct 1097102 ATGGGTTACCAGTCTCGGTCTGAGCCTCAAGGATGGAGTACCAAAGC---TTCTGAGCGC 1097158 Query 153793 GCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGT 153852 | | | || || ||| ||||| ||||||| ||||||||| ||| || || | Sbjct 1097159 GGATCGTCTTGCGGCCGCGACCCTCCTTCTCGTACTTCTCGTACAGGGCCTCGAATTCCT 1097218 Query 153853 CGCCGTAGCAGTCGGCGAGGCCGGGACACT-GATGCGGACACATCAGCGACCACATATCG 153911 |||||||| ||| || |||||||| |||| | || || ||||| |||| ||| | Sbjct 1097219 CGCCGTAGACGTCAGCCAGGCCGGGGCACTCGCTGGGG-CACATGAGCGTCCA------G 1097271 Query 153912 TCGGCGTTG------ACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGG 153965 ||| |||| || || |||||| || || || | |||||| || | ||| Sbjct 1097272 TCGCCGTTCTTCTCAACACGCTTCATGAAGAGGTCGGGAATCCAGAGGGCCAGGAATAGG 1097331 Query 153966 TCGCGCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGAT-TGA--GCACGCTATAG 154022 ||||| || | |||||| ||| ||| | | || | || | | | || | | || Sbjct 1097332 TCGCGGGCACGGACCTCCTCCTTGCC-ATGGTTC-TTGCGGAGGTCAAGGAACTCGA-AG 1097388 Query 154023 ATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGCTTT---CCGCCC 154079 | |||||||||||| || || | ||| | | | ||||| |||||| || ||| Sbjct 1097389 ACGTCGGCGTGCCAAGGCTCGAGGTATATGCAGAAAGCACCGGGACGCTTGTTACCACCC 1097448 Query 154080 TGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCG 154139 || ||||||| ||| || | |||||| |||| || | ||| || | | || | | | Sbjct 1097449 TGGTCGACGTAGCGGGCCGTGTTGTTGTAGACACGTAGCATAGGGACGATACCATTGGAG 1097508 Query 154140 GTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTAACGCCA 154199 ||||||||||| || | | ||| |||||| | | || ||||| | ||| Sbjct 1097509 GTGCCGTTGGTGCCGGCAATGTAGGAGCCCGTGGCGCGGATGCGGTGGACGTTGAGGCCG 1097568 Query 154200 ATGCCGCC-GCCGTACTTTGATATGGCAGCGCAGTCGCC--CAGCGTCCTGTAGATGCCG 154256 ||||| || ||||| ||| || || || ||| || | || || ||| |||||| Sbjct 1097569 ATGCCACCGGCCGT-CTTGGAGAT--CATGGCACACGTCTTGAGGGTATCGTATATGCCG 1097625 Query 154257 TCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATGCGCGTT 154316 || ||||| || || | ||| | ||| ||||| ||| || || || | | | Sbjct 1097626 TCAATGCTGTCCTCCTTCATATCGACGAGGAAGCACGAGGACAGCTG-GGCCTGAGGGGT 1097684 Query 154317 CCCGCCG-AAAAGAGGGTGGGACTCGCGTGCGT-AAACAGTTTTTGGCTCATCATGCGGT 154374 ||| || || ||||||||| ||||| || || || || |||| ||| | | || Sbjct 1097685 ACCGGCGTTGAAAAGGGTGGGAGATGCGTGGGTGAAGCACTTGTTGG-ACATGAGGTTGT 1097743 Query 154375 ACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATGAGCA 154434 | || |||||| | ||||| | || || ||||||| || || ||||||| || Sbjct 1097744 ATGTCTCGATGACACGCTCGATGTTGTCACCCCAGATGCCGACGGCAACACGCATGATCA 1097803 Query 154435 TGTGCTGCGGACGTTCG 154451 ||||||| ||||| ||| Sbjct 1097804 TGTGCTGGGGACGCTCG 1097820 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||||||| || || |||||||| || || || | | Sbjct 2352926 GACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCA 2352867 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || ||||| |||||||| || || || || ||||| ||| || || | Sbjct 2352866 AAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGGATCTTGGACTTGACG 2352807 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||||| ||||||||||| | || | || || || || || || || Sbjct 2352806 TTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTG 2352747 Query 138601 ACAAAAATCTGCAT 138614 || || |||||||| Sbjct 2352746 ACGAAGATCTGCAT 2352733 >seq51 Length=1305468 Score = 118 bits (130), Expect = 1e-21 Identities = 338/513 (66%), Gaps = 29/513 (6%) Strand=Plus/Minus Query 52329 CCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACACCGCCACG 52388 || ||| | ||||| ||||| | ||||| || | ||||||| || | || | | || Sbjct 1212983 CCTTGCATCCGCAAGAAGGCCGACTGGGCTATCAGGTGGATCCAGGACCGCAACTCTACC 1212924 Query 52389 CTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGGCAGCTTT 52448 | ||| |||| | || ||||| || ||||||||| | || || ||| |||| Sbjct 1212923 TTTGCCCAGCGTCTTGTCGCCTTTGCTGCTGTCGAGGGCATCTTCTTCAGCGGGGCCTTT 1212864 Query 52449 GCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAGCAACGAG 52508 || ||||||| | | || | | || | ||||| || ||||| ||| |||||| Sbjct 1212863 GCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCAGGTCTGACCTTCTCTAACGAG 1212804 Query 52509 TTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT------CT---ACTAC 52559 | || ||||| ||||| || || ||||| |||||||| ||||| || || | Sbjct 1212803 CTCATCTCGCGTGACGAGGGTCTCCACACCGACTTTGCCTGCCTGCTGCACTCGCACCTC 1212744 Query 52560 AAGACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAAGGAGGCG 52619 ||| |||| | | | | ||| | ||||| || ||| || || Sbjct 1212743 AAGCACCGCGCCAGCAAGCA----GAT-CATCCACGAA-------ATCATCACCGATGCC 1212696 Query 52620 GTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGGCATGAAC 52679 || || || || |||||||| | || | || ||||| | ||||| |||||||| Sbjct 1212695 GTCGCCATTGAGAAGGAGTTCCTCACAGAAGCTCTGCCCTGTGCCCTGCTCGGCATGAAT 1212636 Query 52680 GCGCAGTCCATG-TGCG--AGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCAGCTC 52736 || ||| || ||| ||||||| |||||||| || || ||||| |||| ||| Sbjct 1212635 GCC---TCCCTGATGCAGCAGTACATTGAGTTTGTCGCAGACCGTCTACTGGTCGCCCTC 1212579 Query 52737 GGGCA-GCCAAAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATTTCGCT 52795 || | | ||| || || |||| | ||| || || || || ||| | ||||| || || Sbjct 1212578 GGCAACGACAAGGT-CTACAACTCGACCAACCCCTTCGACTTCATGGAGAACATCTCCCT 1212520 Query 52796 TGAGGGCAAGACCAACTTTTTCGAGAAGCGAGT 52828 | |||||||||||||| ||||||||||| || Sbjct 1212519 GGGTGGCAAGACCAACTTCTTCGAGAAGCGTGT 1212487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261947160560