Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq43 120 7e-22 seq46 118 2e-21 >seq43 Length=2457951 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||||||||| |||||||| |||| ||||||||| || || | ||||| Sbjct 2352944 AGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 2352885 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || ||||| || |||||||||||||| || || || ||| Sbjct 2352884 TCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 2352825 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| ||| || | |||||| | | || || || | ||||| ||| Sbjct 2352824 TGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTC 2352765 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || || || || || Sbjct 2352764 TTCCCCGTGAGGGTCTTGACGAAGATCTG 2352736 Score = 89.7 bits (98), Expect = 1e-12 Identities = 111/152 (73%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| | ||| || || |||||| |||| ||||||||| | || || | || || Sbjct 65848 AGGACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCC 65789 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| || || ||||| |||||||||||||| ||| || || || ||| Sbjct 65788 TCCAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 65729 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTC 199569 || ||||| |||||| |||| |||||| Sbjct 65728 TGGATCTTGGACTTCACATTGTCGATGGTGTC 65697 >seq46 Length=2353920 Score = 118 bits (130), Expect = 2e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| ||||| || ||||||||||| |||| ||||||||| | || || | || || Sbjct 1617594 AGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCC 1617653 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| |||||||| || || |||||||||||| || || ||| ||| Sbjct 1617654 TCAAGCTGCTTTCCAGCGAAGATCAGGCGTTGCTGGTCCGGAGGGATGCCCTCTTTGTCC 1617713 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||| || || | ||||| | | || || || | ||||| ||| Sbjct 1617714 TGGATCTTGGACTTGACATTGTCAATAGTGTCCGAAGACTCGACCTCAAGGGTGATGGTC 1617773 Query 199598 TTACCCGTGAGAGTTTTCACAAA 199620 || ||||| || || ||||| || Sbjct 1617774 TTGCCCGTCAGGGTCTTCACGAA 1617796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178920497339891