Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq51 269 3e-67 seq43 120 3e-22 seq46 111 2e-19 >seq51 Length=1305468 Score = 269 bits (298), Expect = 3e-67 Identities = 564/828 (68%), Gaps = 23/828 (3%) Strand=Plus/Plus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 ||||| || || || || || || ||| ||| ||| | ||| || || ||||||||| Sbjct 1212493 TTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTG 1212552 Query 132685 GCTGTGTTGTAGTGCTTGG---TGCCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741 | | ||||||| |||| |||||| || |||| || || | ||| || || ||| Sbjct 1212553 GTCGAGTTGTAGACCTTGTCGTTGCCGA---GGGCGACCAGTAGACGGTCTGCGACAAAC 1212609 Query 132742 TCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGCAGACGCACCGG-CAGCGCTTC 132800 || ||||| ||| ||| | ||| | || ||||| |||| || ||| ||||| Sbjct 1212610 TCAATGTACTGCTGCATCAGGGAGGCATTCATGCCGAGCAGG-GCACAGGGCAGAGCTTC 1212668 Query 132801 GGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGC 132860 ||||| || | ||| |||||||| || ||||||| |||||| | | | | Sbjct 1212669 TGTGAGGAACTCCTTCTCAATGGCGACGGCATCGGTGATGATTTCGTGGATGATCTGCTT 1212728 Query 132861 GCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTC 132920 ||| | || ||| | ||| | || || ||| ||||||||| || | ||||| Sbjct 1212729 GCTGGCGCGGTGCTTGAGGTGCGAGTGCAGCAGGCAGGCAAAGTCGGTGTGGAGACCCTC 1212788 Query 132921 GTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAG 132980 ||| | || ||||| ||||| ||| |||| || ||||| || || || || ||||| Sbjct 1212789 GTCACGCGAGATGAGCTCGTTAGAGAAGGTCAGACCTGGCATCAGACCACGCTTCTTGAG 1212848 Query 132981 CCAAAATATGGCGGCGAAACTGCCCGAA-AAGAAGACGCCCTCGACGGCCGCGAAAGCCA 133039 ||| || |||| || ||| |||| ||||||| ||||||||| || || || || | Sbjct 1212849 CCAGAAGATGGAAGC-AAAGGCCCCGCTGAAGAAGATGCCCTCGACAGCAGCAAAGGCGA 1212907 Query 133040 CCAGGCGCTCGCCGAACGTGGCTT--CTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGC 133097 | || |||| | | || || | | | | |||| ||||| | | ||||| ||||| Sbjct 1212908 CAAGACGCTGGGCAAAGGTAGAGTTGCGGTCCTGG--ATCCACCTGATAGCCCAGTCGGC 1212965 Query 133098 CTTTTCTTTGACGCACGGCATCGTTTCGATGGCGTTCAACAAACGGAGTTTCTCTTCCGA 133157 ||| | || ||| || || || || |||||||| || | | | | | || || Sbjct 1212966 CTTCTTGCGGATGCAAGGGATGGTCTCAATGGCGTTGAAGAG--GTATGTGCGCTGG-GA 1213022 Query 133158 GGAACGC---ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCAT 133214 || | | |||||| ||||||||| || || |||||||||| | ||||||||| Sbjct 1213023 GGGTTCCTTGATGTAGGTATCGATGAGGAGAGAGTAGGTTTCCGAGTGAATGTTCTCCAT 1213082 Query 133215 GGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACG 133274 ||| || || ||||| ||||| || |||||| | ||| || || | |||||| Sbjct 1213083 CATGATCTGGAAACCGTAGAAGCAGCGGGCCTCGGGGATCTGGACCTCGCCACTGAAACG 1213142 Query 133275 CTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTT 133334 ||| || || || |||||||| ||||| || ||| ||||| ||||| || | ||| Sbjct 1213143 CTCAACGAGGTTCTCGTTGACAATGCCATCAGAGGCAGCGAAGAAGGCAAGGATGTGAGA 1213202 Query 133335 GATGAAATGGCGCTCGTTGTCGTTCAAGCGCTC---CCAGTCGCGCGTGTCCTTGGACAG 133391 |||||| ||||| || || | ||| | ||||||| | |||||||||||| Sbjct 1213203 GATGAAGAACTTCTCGTCATCATTGATGCGGTTGTTCCAGTCGTGGAGGTCCTTGGACAG 1213262 Query 133392 GTCCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 ||| | ||||||| ||||||| || || |||||||| || |||||||| Sbjct 1213263 GTCAATCTCCTCGGCGGTCCAGAAAGAGGCCTCGGCCTTCTTGTACAT 1213310 >seq43 Length=2457951 Score = 120 bits (132), Expect = 3e-22 Identities = 160/220 (73%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || ||||| || || |||||||| || || |||||| | || || ||| | Sbjct 2352730 AAGATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACTATCACCCTTGAGGTGGAGTCT 2352789 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 |||||| | | | |||| | || || |||| ||||| ||||| || ||| | || Sbjct 2352790 TCCGACACCATTGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGA 2352848 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| || || | || ||||| ||||| || || | |||||||| | |||||| Sbjct 2352849 CCAGCAGCGCCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTA 2352908 Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||||||| ||||| | || || || |||| || ||| Sbjct 2352909 CAACATCCAGAAGGAGTCCACTCTCCACCTGGTCCTCCGT 2352948 Score = 104 bits (114), Expect = 2e-17 Identities = 112/146 (77%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 38328 AAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAA 38387 || |||| ||||| ||||| || || ||||||| ||||| || || | || || || Sbjct 65721 AAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTCTTATCTTTGCTGGTAAG 65780 Query 38388 CAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA-AGCGACGCTGCA 38446 |||||||| |||| |||||||| ||||||||||||||| ||||| ||| || ||||| Sbjct 65781 CAGCTGGAGGACGGTCGCACCCTGTCCGACTACAACATCCAGAAGGAGAGC-ACCCTGCA 65839 Query 38447 TTTGGTGCTGCGTTTGAGAGGCGGCC 38472 ||||| || ||| | | ||||||| Sbjct 65840 CTTGGTCCTCCGTCTCCGTGGCGGCC 65865 >seq46 Length=2353920 Score = 111 bits (122), Expect = 2e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312 ||||| || || || |||||||| ||||||||| | || |||||| | | |||| | Sbjct 1617796 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCTTCGGACACTATT 1617737 Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372 | | | || || |||| ||||||||||| || || | ||||| || || || Sbjct 1617736 GACAATGTCAAGTCCAAGATCCAGGACAAAGAGGGCATCCCTCCGGACCAGCAACGCCTG 1617677 Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432 || | ||| || || ||||| || |||| |||||||| ||||||||||||||| ||| Sbjct 1617676 ATCTTCGCTGGAAAGCAGCTTGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAG 1617617 Query 38433 GAAGCGACGCTGCATTTGGTGCTGCG 38458 || |||| ||||| |||| || || Sbjct 1617616 GAGTCGACCCTGCACCTGGTCCTCCG 1617591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172343592320