Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq56 271 1e-67 seq46 140 4e-28 >seq56 Length=1609917 Score = 271 bits (300), Expect = 1e-67 Identities = 483/702 (69%), Gaps = 6/702 (1%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || |||||||||| ||| || || || ||||| | ||||| || |||||||| Sbjct 1005355 TCGAAGTCCTCACCACCCAGGTGAGTGTCACCAGCGGTGGACTTGACCTCGAAGATACCC 1005414 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | || ||| | | | |||||||| || ||||||||||| ||||| || ||||| ||| Sbjct 1005415 TCCTCGATGGTCAGGAGGGAAACATCGAAAGTACCACCACCAAGGTCGAAGATGAGGACG 1005474 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || ||| | || | ||||| || |||||||| || || || || || || || || Sbjct 1005475 TTGCGCTCGCCCTCCATCTTCTTGTCAAGACCGTAGGCAATGGCAGCAGCAGTAGGCTCG 1005534 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 || || ||||| || ||| || || ||||| | || || || || || || || Sbjct 1005535 TTGATGATACGGAGGACGTTGAGACCGGCAATGAGACCGGCGTCCTTGGTGGCCTGACGC 1005594 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 || || ||||| |||||||| ||||| || || || |||| | ||| | ||||| Sbjct 1005595 TGAGAGTCGTTGAAGTAGGCGGGGACGGTGACAACGGCGTTCTGGACGGTGCCGCCGAGG 1005654 Query 7757 TACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCA 7816 || | || || | || ||| ||||| || ||||| || || ||||| |||| || Sbjct 1005655 TAGGCCTCAGCTGTCTCGCGCATCTTGGTGAGGACCATGGAGGAGATCTCCTCAGGCGTG 1005714 Query 7817 AACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGG 7876 ||||| || || || || || || ||||| | || ||||| || ||||| | | | Sbjct 1005715 AACTGCTTGGTCTCGCCCTTGAACTCAACCTGGATGATGGGCTT-TCCGC--CCTTGTCG 1005771 Query 7877 ATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTT 7936 | || | | | | ||||| ||| | ||||||| |||| ||||| | Sbjct 1005772 ACAATGGCGAAGGGGAAGTGCTTCATGTCGGCCTGGACCTCGGGGTCGCTGAACTTGCGG 1005831 Query 7937 CCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTC 7996 ||||| |||||||| || || || || ||||| |||||||||||| |||||||| Sbjct 1005832 CCGATGAGACGCTTGGCGTCGAAGACGGTGTTGGAGGGGTTCATGGCCACCTGGTTCTTG 1005891 Query 7997 GCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTT 8056 || || || ||||| ||||| || | || || || || ||| | || ||||| || Sbjct 1005892 GCGGCATCACCGATGAGACGCTC---GGTGTCGGTGAAGGCAACGAAGGAAGGGGTTGTG 1005948 Query 8057 CGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCAC 8116 || || || |||||||| ||||| || || |||||| | | ||| || ||||| Sbjct 1005949 CGGTTGCCCTGGTCGTTGGCAATGATATCGCAGCGGTCCTCACGGAAGATACCCACGCAA 1006008 Query 8117 GAATACGTTGTTCCTAAATCAATACCGATTGCTTGAGTCATT 8158 || ||||| || || || || ||||||| || ||| |||| Sbjct 1006009 GAGTACGTGGTACCCAAGTCGATACCGACGGCGGGAGCCATT 1006050 >seq46 Length=2353920 Score = 140 bits (154), Expect = 4e-28 Identities = 358/540 (66%), Gaps = 5/540 (1%) Strand=Plus/Plus Query 7244 AGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAA 7303 || ||||| || || |||||||| |||| | | | || |||| ||| | | || Sbjct 1241888 AGCTCCTCGAAGCGGGCACGGGTGATGGTCATGGCGTAGTCCTCGCCATCGAAGAGAGAG 1241947 Query 7304 TCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCC 7363 || || ||||| | | || || ||| | || ||||| || ||||| || || Sbjct 1241948 TCGATCTCAATCATGGCCTGGGCACCGCTAGACAGGGTACGCTTGGCACGCTCGCAAGCA 1242007 Query 7364 GTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTA 7423 || || | ||| || || ||||| |||| ||||| | || ||||| || || Sbjct 1242008 GTGCGGAGACGGCGGAGAGCACGGGGGTCGCCGGAGAGGTCCTTCTTGCTCTTGCGGAGG 1242067 Query 7424 AACTCTTCAGAGAAGTG-TCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGT 7482 || || | | |||| |||| |||| | | ||||| || | |||||||| || || Sbjct 1242068 AAGTCCTTCTTGCAGTGCTCGA-GGAGGTTGGTGTCGAAGTCCTGACCACCCAGATGAGT 1242126 Query 7483 ATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATC 7542 || || || || || ||||| |||| || || | ||||| | || || ||||| Sbjct 1242127 GTCACCGGCCGTGGCCTTGACGGTGAAGACGCCACCCTGGATGTTGAGCAGGGAGACATC 1242186 Query 7543 AAACGTACCACCACCCAGGTCAAAAATGAGTACGTT-CGTATCGTCGTCT--TTGTTCTT 7599 ||| ||||| ||||| || || | ||||| ||||| || | | | | ||||| Sbjct 1242187 AAAGGTACCGCCACCAAGATCGTAGATGAGCACGTTGCGCTCCTTGGACGACTTGTTGGA 1242246 Query 7600 ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAG 7659 |||||||||| || || || || || || || || || || ||||| ||| ||| || Sbjct 1242247 GCCGAGACCGTAGGCAATGGCGGCGGCGGTGGGCTCGTTGATGATACGGAGAACGTTGAG 1242306 Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719 ||| ||||| | | || || || || || || || || ||||| |||||||| || Sbjct 1242307 GCCGGCAATGGCACCGGCGTCCTTGGTGGCCTGACGCTGGTTGTCGTTGAAGTAGGCGGG 1242366 Query 7720 GACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779 ||| || | ||| || | | ||| ||||||||||| | | || || || || ||||| Sbjct 1242367 GACGGTGATGACGGCCTTCTCGACCTTCTTACCGAGCTTGGTCTCGGCAATCTCCTTCAT 1242426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132220441320