Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq54 129 5e-25 >seq54 Length=438711 Score = 129 bits (142), Expect = 5e-25 Identities = 153/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 29766 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTA 29825 ||| |||| | || || | ||| ||||| |||| ||| | || ||||| || ||||| Sbjct 361665 GGGGAAGGCACGCGGTTCACGCTCCAGCTGCGTCTCCAGGGCCTCGACGTGGTCAAGGTA 361724 Query 29826 GACGTGAGCGTCTCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAG 29884 |||||| || ||||||| | ||| | || ||| || ||| | || || |||||| | Sbjct 361725 GACGTGTGCATCTCCCATGACGTGCGTCAGGCTC-CCGGGTACGAGATCGCAGACGTGGG 361783 Query 29885 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGT 29944 | ||||||| || || || | ||||||||||||||| ||||| || || || ||||| | Sbjct 361784 CGATCATGTGGGTTAGCAGGGCGTAGCTGGCGATGTTGAAGGGGACGCCCAGACCCATAT 361843 Query 29945 CCCCCGACCTCTGGTAGAGCTGACA 29969 | | |||||||||||| ||||| || Sbjct 361844 CGCACGACCTCTGGTACAGCTGGCA 361868 Score = 100 bits (110), Expect = 2e-16 Identities = 195/287 (68%), Gaps = 6/287 (2%) Strand=Plus/Plus Query 30008 TGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGA 30067 ||||||| || ||||| ||||| | ||| | ||||||||||| ||| ||||| Sbjct 361982 TGTGGCAGGGCGGAAGGGCCATCTTCTTGATGTCGCTCGGGTTCCAGGCTGACATGATGA 362041 Query 30068 TGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTCCACGGCGTTTTGCAGCTGATCCA 30124 |||||| ||| ||| ||||| ||| || || ||| || |||||| || | Sbjct 362042 TGCGCCGGTCAAAAGGGCTGTTCTTGAGCTTGTGGATCACCTCGGC---CAGCTGGTCGA 362098 Query 30125 CCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCACT 30184 | ||| ||| |||||| | | ||| |||||| || ||||| || | ||||| Sbjct 362099 CGCCCTGGCCCTGGTAGTCGGTGCGGGCGTCGACGTACTCGGCGCCGAAGTGGCGCCACT 362158 Query 30185 GGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCA 30244 |||| || || || || |||||||| || | || | ||| | ||||| |||| | Sbjct 362159 GGAAGCCATAGACGGGACCCAGGTCGCCGACCTCGCGGTGGCCCAAGCCGACGCTGTCGA 362218 Query 30245 AAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30291 || || | || |||||| ||||||||||||| || ||| |||| Sbjct 362219 GGAACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCCCGCCTCG 362265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617236458029