Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq51 143 8e-29 seq56 123 7e-23 seq46 105 2e-17 seq43 100 8e-16 >seq51 Length=1305468 Score = 143 bits (158), Expect = 8e-29 Identities = 430/650 (66%), Gaps = 18/650 (3%) Strand=Plus/Minus Query 133305 CCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCACAT 133364 |||| ||||| ||| || || | ||||| |||||| || || || || || | Sbjct 1213117 CCGAGGCCCGCTGCTTCTACGGTTTCCAGATCATGATGGAGAACATTCACTCGGAAACCT 1213058 Query 133365 ATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCACAAAC-TATTCAAC 133423 | ||| || || ||||| |||||||| || || |||| ||||| || | |||||| Sbjct 1213057 ACTCTCTCCTCATCGATACCTACATCAAGGAACCCTCCCAGC-GCACATACCTCTTCAAC 1212999 Query 133424 GCCATTAGCGAATTTCC-TTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGATCCA 133482 |||||| | || ||| ||| || ||||| | ||||||||||| | |||||||| Sbjct 1212998 GCCATT-GAGACCATCCCTTGCATCCGCAAGAAGGCCGACTGGGCTATCAGGTGGATCCA 1212940 Query 133483 GGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttt 133542 |||| | | ||||| ||||| || || ||||||| || |||||||| || Sbjct 1212939 GGACCGCAACTCTACCTTTGCCCAGCGTCTTGTCGCCTTTGCTGCTGTCGAGGGCATCTT 1212880 Query 133543 tttCAGTGGTGCGTTCTGC-TCTATTTTTTGGCTTAAAAAGCGTGGTATTCTACCTGGAC 133601 ||||| || || || ||| || || || ||||| || ||||||||| | | || || | Sbjct 1212879 CTTCAGCGGGGCCTT-TGCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCAGGTC 1212821 Query 133602 TGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACCGAATTTGCCGTTT 133661 || || |||||||| || || || | ||||||| || |||||||| |||||| Sbjct 1212820 TGACCTTCTCTAACGAGCTCATCTCGCGTGACGAGGGTCTCCACACCGACTTTGCCTGCC 1212761 Query 133662 TACTTCACTCTAAATTAGAGCGACCAC-TCAAAAAGAATAAGATTGAAGAAATTATTAGA 133720 | || ||||| | | ||| ||| | || ||| | | || | ||||| || | Sbjct 1212760 TGCTGCACTCGCACCTCAAGC-ACCGCGCCAGCAAGCAGATCATCCACGAAATCATCACC 1212702 Query 133721 GAAGCGGTTGAAATTGAGGTTGAATTTATCAATAGTGCTCTGCC--GTGCCGTTTAATTG 133778 || || || | |||||| || || ||| |||||||| ||||| | | | Sbjct 1212701 GATGCCGTCGCCATTGAGAAGGAGTTCCTCACAGAAGCTCTGCCCTGTGCC--CTGCTCG 1212644 Query 133779 GTATGAATGATGTGCTGATGCAGCGTTATATTGAATTTGTAGCTGACAG---ATTGGCCG 133835 | ||||||| |||||||||| || ||||| ||||| || ||| | | ||| || Sbjct 1212643 GCATGAATGCCTCCCTGATGCAGCAGTACATTGAGTTTGTCGCAGACCGTCTACTGGTCG 1212584 Query 133836 TTCAGTTAGGTGGGGATAAGATTTACGGTTCCGCCAATCCATTCGACTGGATGGAGAGCA 133895 | | || || ||| | ||| || |||| || ||||||| ||||||| || Sbjct 1212583 CCC---TCGGCAACGACAAGGTCTACAACTCGACCAACCCCTTCGACTTCATGGAGAACA 1212527 Query 133896 TTAGCATTGAATCAAAGACTAATTTCTTCGAGGCGAGGGTAGCCGAATAC 133945 | | | | ||||| || ||||||||| | | || || || ||| Sbjct 1212526 TCTCCCTGGGTGGCAAGACCAACTTCTTCGAGAAGCGTGTTGCTGACTAC 1212477 >seq56 Length=1609917 Score = 123 bits (136), Expect = 7e-23 Identities = 125/163 (77%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 251497 ATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCCCTACCCTCG 251556 |||| ||| ||||||||||| || |||| ||| |||||||| ||||| | | ||||||| Sbjct 1023494 ATCAGACAGTCACGCTCCATCTCTCCGAGACGCAGACCACCGTCGCGCGAGCGACCCTCG 1023553 Query 251557 GCAGGCTGACGAGTGAGATTAACCATAGGACCGATGGAGCGGCTATGTTGCTTATCATTT 251616 | ||||||||| ||||| || | || ||| ||||||| || |||||| | Sbjct 1023554 GTAGGCTGACGGGTGAGGATAGCGCGGGGGCCGCGGGAGCGGGAGTGCATCTTATCCTGG 1023613 Query 251617 ACCATATGCTTGAGACGCTGGTAGAATGCGGGACCGATGAAGA 251659 ||||| |||||||||||||||||| | ||||||| |||||| Sbjct 1023614 ACCATGTGCTTGAGACGCTGGTAGTAGATGGGACCGTTGAAGA 1023656 >seq46 Length=2353920 Score = 105 bits (116), Expect = 2e-17 Identities = 173/247 (70%), Gaps = 2/247 (1%) Strand=Plus/Minus Query 302571 GTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGC 302630 |||||||| ||||| | ||| ||||| || || || || | || || || || Sbjct 1222886 GTCTTCCAGCGCCTTGACGAGACGGCGCTGGATGTAGCCGGTCTCGGCAGTCTTGACGGC 1222827 Query 302631 TGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-A 302689 ||||| || ||||| | ||||| |||| || |||||||| | ||| || ||| | Sbjct 1222826 CGTATCGATGAGACCTTCGCGACCGGCCATGGCGTGGAAGAAGAACTCGGTGGG-CGTCA 1222768 Query 302690 GCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGG 302749 | || | | | | ||| |||| ||||| || || | ||||||||| | ||| ||||| Sbjct 1222767 GGCCACGCAGATACGAGTTCTCGACGAAGCCGCGAGACTCGGGCGAGTAGTCATCCTTGG 1222708 Query 302750 TAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCT 302809 | ||||| |||||||| | || || | ||| | ||||||||||| || || || ||| Sbjct 1222707 TGAAGTGCGGCAGGGTGCGGTACTTGAAACCGAAGGGGATACGCTTCCCCTCCACCATCT 1222648 Query 302810 GCTGTCC 302816 |||| || Sbjct 1222647 GCTGACC 1222641 >seq43 Length=2457951 Score = 100 bits (110), Expect = 8e-16 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 251443 GCATCAGATGCGTCATATAGCCGACCCTTGGTGAAGCGAGATGCACCGTGTGAAATCATA 251502 ||||| || | ||| | || || ||||| |||| | |||||||| | ||||||| Sbjct 1511466 GCATCGGAAACTTCAAAAAGACGCTCCTTGAGGAAGGCGGCAGCACCGTGGGCAATCATA 1511525 Query 251503 CAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGAGCCCTACCCTCGGCAGGC 251562 |||||||| |||||||| |||||||| |||||||| || || || | ||||||| ||||| Sbjct 1511526 CAATCACGTTCCATTTCTCCGAAACGCAGACCACCGTCTCGGGCACGACCCTCGACAGGC 1511585 Query 251563 TGACGAGT 251570 || | ||| Sbjct 1511586 TGTCTAGT 1511593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816223390601