Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28]
73 sequences; 26,549,069 total letters
Query= NC_026421.1
Length=182380
Score E
Sequences producing significant alignments: (Bits) Value
seq54 143 3e-29
>seq54
Length=438711
Score = 143 bits (158), Expect = 3e-29
Identities = 224/319 (70%), Gaps = 5/319 (2%)
Strand=Plus/Plus
Query 146772 CTAAACCGCCAGCGCCATGGGGATGGAGGGGTGCGGGTGGTAGCCCTCGAGGGCAAAATC 146831
|||||| | || | ||| | ||| || ||||| | ||| |||| || ||||||
Sbjct 361551 CTAAACAGACATCTTCATAGCGATTGACTTATGCGGCTCGTACCCCTTGATTATAAAATC 361610
Query 146832 TTCTGCCCTGAAATCGTCTATGTCCTCCACCCGCCTCA----AAATCTTGAGCTTGGGGA 146887
|| ||| | || |||| ||| | || ||| ||| | || | | || |||||
Sbjct 361611 CTCAGCCTTCCAACCGTCGATG-CTACCGCCCTTCTCCCTGGATATGTCCAACTCGGGGA 361669
Query 146888 AGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGT 146947
||| || || | | ||||||| | | ||||| ||| ||||||| ||||||||||
Sbjct 361670 AGGCACGCGGTTCACGCTCCAGCTGCGTCTCCAGGGCCTCGACGTGGTCAAGGTAGACGT 361729
Query 146948 GCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCA 147007
| || || |||| | |||| | | ||| || || || |||||||| | ||
Sbjct 361730 GTGCATCTCCCATGACGTGCGTCAGGCTCCCGGGTACGAGATCGCAGACGTGGGCGATCA 361789
Query 147008 TGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCG 147067
||| ||| ||||| | ||||||||| |||||||||||||| ||||| ||||| || | ||
Sbjct 361790 TGTGGGTTAGCAGGGCGTAGCTGGCGATGTTGAAGGGGACGCCCAGACCCATATCGCACG 361849
Query 147068 ACCTCTGGTACAGCTGGCA 147086
|||||||||||||||||||
Sbjct 361850 ACCTCTGGTACAGCTGGCA 361868
Score = 109 bits (120), Expect = 6e-19
Identities = 159/225 (71%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 147231 CAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAA 147290
||||||||| |||||||||||| ||||| || | | ||| |||||| ||| || ||
Sbjct 362088 CAGCTGGTCGACGCCCTGGCCCTGGTAGTCGGTGCGGGCGTCGACGTACTCGGCGCCGAA 362147
Query 147291 GTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCC 147350
||| | |||||||||||| || || || |||||||||||| || | ||| |||||
Sbjct 362148 GTGGCGCCACTGGAAGCCATAGACGGGACCCAGGTCGCCGACCTCGCGGTGGCCCAAGCC 362207
Query 147351 CGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGA 147410
| | | ||| |||||| | || |||| | |||||||||| || ||| ||
Sbjct 362208 GACGCTGTCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCCCGCCTCGCT 362267
Query 147411 GAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTC 147455
||| |||| |||| |||| ||| |||||||| |||||
Sbjct 362268 CAGCGGTATAGACGACGTGCTGCCCTCGATAAACCAGAGGAGCTC 362312
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583487467567200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |