Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq54 143 3e-29 >seq54 Length=438711 Score = 143 bits (158), Expect = 3e-29 Identities = 224/319 (70%), Gaps = 5/319 (2%) Strand=Plus/Plus Query 146772 CTAAACCGCCAGCGCCATGGGGATGGAGGGGTGCGGGTGGTAGCCCTCGAGGGCAAAATC 146831 |||||| | || | ||| | ||| || ||||| | ||| |||| || |||||| Sbjct 361551 CTAAACAGACATCTTCATAGCGATTGACTTATGCGGCTCGTACCCCTTGATTATAAAATC 361610 Query 146832 TTCTGCCCTGAAATCGTCTATGTCCTCCACCCGCCTCA----AAATCTTGAGCTTGGGGA 146887 || ||| | || |||| ||| | || ||| ||| | || | | || ||||| Sbjct 361611 CTCAGCCTTCCAACCGTCGATG-CTACCGCCCTTCTCCCTGGATATGTCCAACTCGGGGA 361669 Query 146888 AGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGT 146947 ||| || || | | ||||||| | | ||||| ||| ||||||| |||||||||| Sbjct 361670 AGGCACGCGGTTCACGCTCCAGCTGCGTCTCCAGGGCCTCGACGTGGTCAAGGTAGACGT 361729 Query 146948 GCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCA 147007 | || || |||| | |||| | | ||| || || || |||||||| | || Sbjct 361730 GTGCATCTCCCATGACGTGCGTCAGGCTCCCGGGTACGAGATCGCAGACGTGGGCGATCA 361789 Query 147008 TGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCG 147067 ||| ||| ||||| | ||||||||| |||||||||||||| ||||| ||||| || | || Sbjct 361790 TGTGGGTTAGCAGGGCGTAGCTGGCGATGTTGAAGGGGACGCCCAGACCCATATCGCACG 361849 Query 147068 ACCTCTGGTACAGCTGGCA 147086 ||||||||||||||||||| Sbjct 361850 ACCTCTGGTACAGCTGGCA 361868 Score = 109 bits (120), Expect = 6e-19 Identities = 159/225 (71%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 147231 CAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAA 147290 ||||||||| |||||||||||| ||||| || | | ||| |||||| ||| || || Sbjct 362088 CAGCTGGTCGACGCCCTGGCCCTGGTAGTCGGTGCGGGCGTCGACGTACTCGGCGCCGAA 362147 Query 147291 GTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCC 147350 ||| | |||||||||||| || || || |||||||||||| || | ||| ||||| Sbjct 362148 GTGGCGCCACTGGAAGCCATAGACGGGACCCAGGTCGCCGACCTCGCGGTGGCCCAAGCC 362207 Query 147351 CGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGA 147410 | | | ||| |||||| | || |||| | |||||||||| || ||| || Sbjct 362208 GACGCTGTCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCCCGCCTCGCT 362267 Query 147411 GAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTC 147455 ||| |||| |||| |||| ||| |||||||| ||||| Sbjct 362268 CAGCGGTATAGACGACGTGCTGCCCTCGATAAACCAGAGGAGCTC 362312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487467567200