Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq51 120 1e-21 seq43 105 2e-17 >seq51 Length=1305468 Score = 120 bits (132), Expect = 1e-21 Identities = 361/541 (67%), Gaps = 21/541 (4%) Strand=Plus/Minus Query 443337 TTTTGGACCATGGAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTA 443396 || |||||| ||||||||||| || ||||||||| | ||| |||||| | || | Sbjct 1213286 TTCTGGACCGCCGAGGAGATTGACCTGTCCAAGGACCTCCACGACTGGAACAACCGC--A 1213229 Query 443397 TCTAGCCATGAACGCGAT-TTCTTCAAATG---CATCTTGGCCTTCTTTGCACCGAGCGA 443452 || | |||| || || ||||||| | |||| | |||||||| || | || Sbjct 1213228 TCAATG-ATGA-CGAGAAGTTCTTCATCTCTCACATCCTTGCCTTCTTCGCTGCCTCTGA 1213171 Query 443453 CGGTATCGTCGGTGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGC 443512 || || ||| ||||| || || ||||||| | ||| | | ||||||| Sbjct 1213170 TGGCATTGTCAACGAGAACCTCGTTGAGCGTTTCAGTGGCGAGGTCCAGATCCCCGAGGC 1213111 Query 443513 CCGCTACTTCTACGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCA 443572 ||||| |||||||| ||||| | ||||||||||||||| | || |||| || Sbjct 1213110 CCGCTGCTTCTACGGTTTCCAGATCATGATGGAGAACATTCACTCGGAAACCTACTCTCT 1213051 Query 443573 GTTGATCAAGACACTAATTCCGAACGAAGACGAACAGCGGTCCATCTTCT-CATCGTTCA 443631 | ||| | || ||| || || ||| | ||||| | | ||| || || || Sbjct 1213050 CCTCATCGATAC-CTACATC--AAGGAACCCTCCCAGCGCACATACCTCTTCAACGC-CA 1212995 Query 443632 T---GACCACGCCAGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGAACGA- 443687 | ||||| || ||||| | ||| | |||||| | |||| || | || Sbjct 1212994 TTGAGACCATCCCTTGCATCCGCAAGAAGGCCGACTGGGCTATCAGGTGGATCCAG-GAC 1212936 Query 443688 -GAAAATCTCAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTT 443746 | || ||| | ||| | | |||| || ||||| ||||||| ||||| || | || || Sbjct 1212935 CGCAACTCT-ACCTTTGCCCAGCGTCTTGTCGCCTTTGCTGCTGTCGAGGGCATCTTCTT 1212877 Query 443747 TAGCGGCAGCTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGA 443806 ||||| |||| || |||||||||||| | || |||||||| || |||| ||||||| Sbjct 1212876 CAGCGGGGCCTTT-GCTTCCATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCAGGTCTGA 1212818 Query 443807 CCTTTAGTAACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTC 443866 |||| |||||| || ||| || ||||||||| | || |||||| ||||| || | Sbjct 1212817 CCTTCTCTAACGAGCTCATCTCGCGTGACGAGGGTCTCCACACCGACTTTGCCTGCCTGC 1212758 Query 443867 T 443867 | Sbjct 1212757 T 1212757 >seq43 Length=2457951 Score = 105 bits (116), Expect = 2e-17 Identities = 333/505 (66%), Gaps = 16/505 (3%) Strand=Plus/Minus Query 256124 CAGATCGAGGAGCACGGACTGCGCAACTCGCAACGATTGGCGCCCATGCCAACCGCCAGC 256183 ||| || |||||||||| ||||||||| | || |||| |||||||| || |||||| Sbjct 1096550 CAGGTCAAGGAGCACGGCACGCGCAACTCTCTACTTGTGGCCCCCATGCCCACGGCCAGC 1096491 Query 256184 ACCGCTCAAATCCTGGGTAACGTGGAAAGCATCGAACCCCTGACTACCAACTTCTTCTCG 256243 || | || |||||||| ||| || || |||| ||| || ||||| ||| |||| Sbjct 1096490 ACGTCGCAGATCCTGGGCAACAATGAGTGCTTCGAGCCCTACACGTCCAACATCTACTCG 1096431 Query 256244 CGCCGCGTTCGCTCCGGCGAGTTCGCCGTGGTGAACCAGTACTTGGTGGACGACTTGGTA 256303 ||||| || | ||||||||||| || || |||| | || | | ||| |||| Sbjct 1096430 CGCCGTGTCCTGGCCGGCGAGTTCCAGGTTGTCAACCCCTGGCTGCTCAAGGACCTGGT- 1096372 Query 256304 CGA-CTCGGTCTGTGGAACGAGAAGATGCAACAACGCATAATTCGGGCCCGTGGGTCGGT 256362 ||| ||||| |||||| ||| ||| | | ||||| ||| | || ||| | Sbjct 1096371 CGAGCTCGGCCTGTGGTCCGACGCCATGAAGAACCGCATTATTGCTGAAAACGGCTCGAT 1096312 Query 256363 GCAGAACATTGAGCGCTTGCCGTTCCGCTTGCGCGAGG---TATACCGCACGGTATGGGA 256419 |||||||| | | || | | | ||| | ||| ||||||||||| Sbjct 1096311 CCAGAACATCCCCAACATCCC---CGACGATGTCAAGGCCCTGTACAAGACGGTATGGGA 1096255 Query 256420 GATGCCGCAACGATTGTTGGTCGACTTGTGCGCAGCACGACAACCGTTTGTGGATCAGTC 256479 ||| | || || | || | || || | || | ||| | |||||||| Sbjct 1096254 GATTTCCCAGCGCCACGTCGTGCAGATGGCTGCCGACCGTGGTGCCTTTATCGATCAGTC 1096195 Query 256480 GCAAAGCCTCAACCTCTACTTTCCGGTGCCCAAC-TTTAAACGCTTGACCAACGCACACT 256538 ||| |||||| || || | || |||| | | | | || |||| | |||| Sbjct 1096194 GCAGTCTCTCAACATCCACATGAAGGACCCCACCATGGGCAAGATT-ACCAGCATGCACT 1096136 Query 256539 TTTACGGGTGGCGAAAC--GGCCTGAAGACGGGCATGTACTACCTGCGCACC-CGACCAG 256595 || |||||| ||| | || || ||||||||||||||||||||||||||| || || | Sbjct 1096135 TTGCCGGGTG--GAAGCTGGGTCTCAAGACGGGCATGTACTACCTGCGCACCACGGCC-G 1096079 Query 256596 CGGCCGACCCGATCCAATTCACCGT 256620 | |||| ||| ||||| |||||||| Sbjct 1096078 CCGCCGCCCCCATCCAGTTCACCGT 1096054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588334514409485