Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq43 174 2e-38 seq51 100 4e-16 >seq43 Length=2457951 Score = 174 bits (192), Expect = 2e-38 Identities = 1036/1632 (63%), Gaps = 63/1632 (4%) Strand=Plus/Plus Query 110551 CTTGATATCATCTGGGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCA---- 110606 ||||| ||| || ||||| | | ||| |||||||| || || | |||| || Sbjct 1096278 CTTGACATCGTCGGGGATGTTGGGGATGTTCTGGATCGAGCC----GTTTTCAGCAATAA 1096333 Query 110607 TGAGATCCTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCT 110666 || | | |||||| | | |||||| || || | || ||||| |||| || Sbjct 1096334 TGCGGTTCTTCATGGCGTCGGACCACAGGCCGAGCTCGACCAGGTCCTTGAGCAGCCAGG 1096393 Query 110667 TGTTGACAATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATG 110726 |||||||| ||||| || || ||| | | | ||||||||| | ||||| | Sbjct 1096394 GGTTGACAACCTGGAACTCGCCGGCCAGGACACGGCGCGAGTAGATGTTGGACGTGTAGG 1096453 Query 110727 GTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCA 110786 | || ||||| ||||| || |||| ||| || | ||| ||| || ||||| || |||| Sbjct 1096454 GCTCGAAGCACTCATTGTTGCCCAGGATCTGCGACGTGCTGGCCGTGGGCATGGGGGCCA 1096513 Query 110787 TCAAAAGACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGT 110846 | ||| ||| || || | |||||||| | |||||||| ||||| || Sbjct 1096514 CAAGTAGAGAGTTGCGCGTGCCGTGCTCCTTGACCTGCTCCTTGAGCGACTCCCACTCCC 1096573 Query 110847 A---GTT-GAGCTTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCG 110902 | || ||| || || || | |||||||||| ||||| || | || | ||| ||| Sbjct 1096574 ACAGGTCCGAG---GGCTTGACGT-CCCACATGTCGAACTGCAGGATACCCTTGGAGGCG 1096629 Query 110903 GGAGAACCCTCAAAGGTTTCATA-GGAACCTTGGGCTTCAGCCA-ATTCACAGCTCGCCT 110960 || || |||| ||||| | || || ||| ||||| |||| | ||| | | || Sbjct 1096630 GGCGAGCCCTGGAAGGTCTGGTAGGGGCCCTCCTGCTTC-GCCAGCTCCACCG-ACTCCG 1096687 Query 110961 CCAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTG 111020 || || ||||| || ||||| |||||||| | |||| || ||| || | Sbjct 1096688 TCACGGCGGCGTGGTAGATGGTCTCAAAGATCTGCAGGTTCAGCTGACGGGCCTCGGGCG 1096747 Query 111021 AATCAA-----ATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAA 111075 | |||| ||||| || | | | || | || |||||||| || | ||| | Sbjct 1096748 ACTCAAAGGGCATGCGCAGAGCC-----AGGAAGGCGTCGGCGAGACCCTGGATACCGAG 1096802 Query 111076 ACCAATAGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCT 111135 ||||| || | ||| ||||| || || || || ||| ||||| || | || Sbjct 1096803 GCCAATGGGGCGGTGGCGCATGTTGCTGTTGCGGGCCTCCTCGACGGGGTAGTAGTTGAC 1096862 Query 111136 GTCAATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATA 111195 |||||||| | ||| || || | || | || | || || || || | | Sbjct 1096863 GTCAATGATCCTGTTGAGGTTGCGGACGACGACACGCGTCACCTCGTGCAGCTTGTTGAA 1096922 Query 111196 ATC--AAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTG 111253 || | || ||| | || | | |||| | || ||||| | || |||| ||| Sbjct 1096923 GTCGTAGCAG-GCG-TTGTCGTAGTCGACAAAGGCCGGCAGGGCCAGAGAGGCCAGGTTG 1096980 Query 111254 CAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTC 111313 || || || ||||| | | |||||| | ||| || || || | ||| || || Sbjct 1096981 CAGACGGCGACTTCATCGGGGGCCGAGTACTCAACAATCTCGGTGCAGAGGTTCGAGCTG 1097040 Query 111314 TTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATG 111373 || || |||| ||||| ||||| ||||| |||||| |||||||||||||| Sbjct 1097041 CGGATGGTACCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAGAGCATA 1097100 Query 111374 TAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCG-GCTG 111431 | || | || ||||| ||||| | | || || | | ||||| | || | | || | Sbjct 1097101 AATGGGTTACCAGTCTCGGTCTGAGCCTCAAGGATGGAGTACCAAAGCTTCTGAGCGCGG 1097160 Query 111432 GTACAATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCT 111491 | | ||| | | || |||||| ||||||||| ||| ||||| || || |||| Sbjct 1097161 ATCGTCTTGCG--GCCGCGACCCTCCTTCTCGTACTTCTCGTACAGGGCCTCGAATTCCT 1097218 Query 111492 CACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCAC 111551 | || |||| | || || || || | || || | || | ||| | || Sbjct 1097219 CGCCGTAGACGTCAGCCAGGCCGGGGCACTCGCTGGGGCACATGAGCGTCCAGTCGCCGT 1097278 Query 111552 CTTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTC-TA 111610 | |||||| ||||||||||| ||||| |||||||| |||| || || || | Sbjct 1097279 TCTTCTCAACACGCTTCATGAAGAGGTCGGGAATCCAGAGGGCCAGGAATAGGTCGCGGG 1097338 Query 111611 CACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCG 111670 ||| || |||| || | || ||||| || | ||||||||||| | || || ||| Sbjct 1097339 CACGGA-CCTCCTCCTTGCCATGGTTCTTGCGGAGGTCAAGGAACTCGAAGACGTCGGCG 1097397 Query 111671 TGCCATGGCTCAAGATAGACTGC-GATAGATCCCTTTCGACGC------CCAGCTTGATT 111723 ||||| ||||| || || | ||| || || || ||||| ||| | || | Sbjct 1097398 TGCCAAGGCTCGAGGTATA-TGCAGAAAGCACC---GGGACGCTTGTTACCACCCTGGTC 1097453 Query 111724 TACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACC 111783 || ||||| || ||| ||| | || || ||||| || | ||||||| || || Sbjct 1097454 GACGTAGCGGGCCGTGTTGTTGTAGACACGTAGCATAGGGACGATACCATTGGAGGTGCC 1097513 Query 111784 ATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACC 111843 || || || ||| || |||| | | |||| || | || || || Sbjct 1097514 GTTGGTGCCGGCAATGTAGGAGCCCGTGGCGCGGATGCGGTGGACGTTGAGGCCGATGCC 1097573 Query 111844 CCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGA 111903 || ||| ||| ||||| |||||| | | || || | || || |||| || Sbjct 1097574 ACCGGCCGTCTTGGAGATCATGGCACACGTCTTGAGGGTATCGTATATGCCGTCAATGCT 1097633 Query 111904 GTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCT-TGGTGTACCAGCAT 111962 ||||||||| | ||| |||||||| ||||| ||| || || || ||||| || | Sbjct 1097634 GTCCTCCTTCATATCGACGAGGAAGCACGAGGACAGCTG-GGCCTGAGGGGTACCGGCGT 1097692 Query 111963 TGAAGAGGGTTGGTGTTGCGTGAATGAA-CATACCTTG--GGACATCTTGTCGTATGTCT 112019 |||| ||||| || | |||||| |||| || |||| |||||| || |||||||| Sbjct 1097693 TGAAAAGGGTGGGAGATGCGTGGGTGAAGCA---CTTGTTGGACATGAGGTTGTATGTCT 1097749 Query 112020 CCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACT 112079 | | |||| || |||| || || |||||||| || || ||||||| ||||| || Sbjct 1097750 CGATGACACGCTCGATGTTGTCACCCCAGATGCCGACGGCAACACGCATGATCATGTGCT 1097809 Query 112080 GTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGA--AGATAGCTCTTCTCAAGGGTTTT 112137 | || || | | |||||| |||| |||| || ||| ||||||||| || Sbjct 1097810 GGGGACGCTCGACAATCTTGCCATTGAGC--TTGAGCAGGTAGGAGCGCTCAAGGGTCTT 1097867 Query 112138 GAGACCAAAGTA 112149 || || ||||| Sbjct 1097868 GAAGCCGAAGTA 1097879 >seq51 Length=1305468 Score = 100 bits (110), Expect = 4e-16 Identities = 301/459 (66%), Gaps = 22/459 (5%) Strand=Plus/Plus Query 122371 TAGTCCCCGACCCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATA 122430 ||||| | || |||||||| |||||||||||||| ||| | ||| ||||| ||||| Sbjct 1212478 TAGTCAGCAACACGCTTCTCGAAGAAGTTGGTCTTGCCACCCAGGGAGATGTTCTCCATG 1212537 Query 122431 AAGTCAAATGGATTCTTCGCGTTCCAAATGG-GTGGCACCCCAACTTGTTTGAGGAGACG 122489 ||||| || || || ||| ||| | | || | || | | || ||||| Sbjct 1212538 AAGTCGAAGGGGTTGGTCGAGTTGTAGACCTTGTCGTTGCCGAGGGCGACC-AGTAGACG 1212596 Query 122490 ATCCGACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGGTTACA 122549 || | ||| |||||||||||| |||| | ||||| |||| ||| ||| Sbjct 1212597 GTCTGCGACAAACTCAATGTACTGCTGCATCAGGGAGGCATTCATGCCGAGCAGGGCACA 1212656 Query 122550 TGGGAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTG 122609 || || || || || |||| | |||||||| | || || || | | ||| |||| Sbjct 1212657 GGGCAGAGCTTCTGTGAGGAACTCCTTCTCAATGGCGACGGCATCGGTGATGATTTCGTG 1212716 Query 122610 GATAGTTTCGGTAGTGGGTCTATTACGCAAAGTCTTGAAGAGC---TCCAC------GGC 122660 ||| | | | ||| ||| | ||||| | || | || ||| Sbjct 1212717 GATGATCTGCTTGCTGG--------CGCGGTG-CTTGAGGTGCGAGTGCAGCAGGCAGGC 1212767 Query 122661 AAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGG 122720 ||| || |||||||||||| || || || || || || || |||||| |||||||| Sbjct 1212768 AAAGTCGGTGTGGAGACCCTCGTCACGCGAGATGAGCTCGTTAGAGAAGGTCAGACCTGG 1212827 Query 122721 CATGAGACCCCGCTTCTTCAACCAATAAATAG-CGCAGAATGACCCGGAGAAGAAGATAC 122779 ||| ||||| |||||||| | ||| | || | ||| || | |||| ||||||||| | Sbjct 1212828 CATCAGACCACGCTTCTTGAGCCAGAAGATGGAAGCA-AAGGCCCCGCTGAAGAAGATGC 1212886 Query 122780 CCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGG 122818 |||| ||| ||||| || | ||| || | ||| |||| Sbjct 1212887 CCTCGACAGCAGCAAAGGCGACAAGACGCTGGGCAAAGG 1212925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031426920800