Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq46 114 4e-20 seq56 100 9e-16 seq43 100 9e-16 >seq46 Length=2353920 Score = 114 bits (126), Expect = 4e-20 Identities = 158/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 140508 ATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCA 140567 ||||||||||| | | || || || || || || ||||| || || || || || || Sbjct 1617576 ATACCACCACGGAGGCGGAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCG 1617635 Query 140568 GATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGA 140627 || | || || || || ||||| || |||||||| ||||| || |||||||| || ||| Sbjct 1617636 GACAGGGTGCGGCCGTCCTCAAGCTGCTTTCCAGCGAAGATCAGGCGTTGCTGGTCCGGA 1617695 Query 140628 GGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCA 140687 || || || ||||| ||||| || || | || ||||| ||||| | || || | || Sbjct 1617696 GGGATGCCCTCTTTGTCCTGGATCTTGGACTTGACATTGTCAATAGTGTCCGAAGACTCG 1617755 Query 140688 ACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAA 140728 || ||||| || | ||||| || || || || || || || Sbjct 1617756 ACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 1617796 >seq56 Length=1609917 Score = 100 bits (110), Expect = 9e-16 Identities = 196/290 (68%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 349610 GCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCT 349669 || ||| | || || || ||||| || || || | |||||| || || || || || Sbjct 1005632 GCCGTTGTCACCGTCCCCGCCTACTTCAACGACTCTCAGCGTCAGGCCACCAAGGACGCC 1005573 Query 349670 GGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATT 349729 || |||||| || | || || || | || || || || || |||||||| || ||| Sbjct 1005572 GGTCTCATTGCCGGTCTCAACGTCCTCCGTATCATCAACGAGCCTACTGCTGCTGCCATT 1005513 Query 349730 GCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGT 349789 || || || ||||| || | || || || || | || || || || | ||| Sbjct 1005512 GCCTACGGTCTTGACAAGAAGATGGAGGGCGAGCGCAACGTCCTCATCTTCGACCTTGGT 1005453 Query 349790 GGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCA 349849 ||||||||||| ||||| || || || || | || ||||| || || || || || | Sbjct 1005452 GGTGGTACTTTCGATGTTTCCCTCCTGACCATCGAGGAGGGTATCTTCGAGGTCAAGTCC 1005393 Query 349850 ACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGT 349899 || |||||||| || || || ||||| || || || || || || || || Sbjct 1005392 ACCGCTGGTGACACTCACCTGGGTGGTGAGGACTTCGACAACCGCCTTGT 1005343 >seq43 Length=2457951 Score = 100 bits (110), Expect = 9e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 140510 ACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGA 140569 ||||||||| | | || || || || ||||| ||||| || || || || || || Sbjct 2352960 ACCACCACGGAGACGGAGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCT 2352901 Query 140570 TAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGG 140629 | || || ||||| || || || || ||||||||||| || || ||||| || || || Sbjct 2352900 CAGGGTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGG 2352841 Query 140630 AATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAAC 140689 || || || || ||||| || || | || || || ||||| | || || | || || Sbjct 2352840 GATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCAC 2352781 Query 140690 TTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 ||||| || | ||||| || || || || || || || |||||||| Sbjct 2352780 CTCAAGGGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 2352733 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515252982763619