Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq54 123 2e-23 >seq54 Length=438711 Score = 123 bits (136), Expect = 2e-23 Identities = 152/205 (74%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 29839 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTTATCCAGGTA 29898 ||| |||| | || || | ||| ||||| |||| ||| | || |||| || ||||| Sbjct 361665 GGGGAAGGCACGCGGTTCACGCTCCAGCTGCGTCTCCAGGGCCTCGACGTGGTCAAGGTA 361724 Query 29899 GACGTGAGCGTCTCCCAGGTTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAG 29957 |||||| || ||||||| | ||| | || ||| || ||| | || || |||||| | Sbjct 361725 GACGTGTGCATCTCCCATGACGTGCGTCAGGCTC-CCGGGTACGAGATCGCAGACGTGGG 361783 Query 29958 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGT 30017 | ||||||| || || || | ||||||||||||||| ||||| || || || ||||| | Sbjct 361784 CGATCATGTGGGTTAGCAGGGCGTAGCTGGCGATGTTGAAGGGGACGCCCAGACCCATAT 361843 Query 30018 CCCCCGACCTCTGGTAGAGCTGACA 30042 | | |||||||||||| ||||| || Sbjct 361844 CGCACGACCTCTGGTACAGCTGGCA 361868 Score = 98.7 bits (108), Expect = 8e-16 Identities = 205/303 (68%), Gaps = 12/303 (4%) Strand=Plus/Plus Query 30062 ACGTAAAACTG---ACACATGGCGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTG 30118 ||||| ||||| | ||||| ||||| || ||||| ||||| | ||| | Sbjct 361963 ACGTAGAACTGGGCAAACATG---TGGCAGGGCGGAAGGGCCATCTTCTTGATGTCGCTC 362019 Query 30119 GGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTCC 30175 ||||||||||| ||| ||||||||||| ||| ||| ||||| ||| || || | Sbjct 362020 GGGTTCCAGGCTGACATGATGATGCGCCGGTCAAAAGGGCTGTTCTTGAGCTTGTGGATC 362079 Query 30176 ACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATGTCCGTGTAC 30235 || || |||||| || || ||| ||| |||||| | | ||| |||| Sbjct 362080 ACCTCGGC---CAGCTGGTCGACGCCCTGGCCCTGGTAGTCGGTGCGGGCGTCGACGTAC 362136 Query 30236 TCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTG 30295 || || ||||| || | ||||||||| || || || || |||||||| || | || | | Sbjct 362137 TCGGCGCCGAAGTGGCGCCACTGGAAGCCATAGACGGGACCCAGGTCGCCGACCTCGCGG 362196 Query 30296 TGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACC 30355 || | ||||| |||| | || || | || |||||| ||||||||||||| || Sbjct 362197 TGGCCCAAGCCGACGCTGTCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGACG 362256 Query 30356 CCC 30358 ||| Sbjct 362257 CCC 362259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406310038510716