Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq54 93.3 4e-14 >seq54 Length=438711 Score = 93.3 bits (102), Expect = 4e-14 Identities = 208/306 (68%), Gaps = 10/306 (3%) Strand=Plus/Plus Query 6724 CGCGACGTAGAATTGGCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTT 6783 || ||||||||| ||| | ||||||| || || || |||||| || || | Sbjct 361959 CGAGACGTAGAACTGGGCAAACATGTGGCAGGGCGGAAGGGCCATCTTCTTGATGTCGCT 362018 Query 6784 CGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGAT 6843 ||||||||| || |||| | ||| | | |||| |||| | ||| | ||| ||| Sbjct 362019 CGGGTTCCAGGCTGACATGATGATGCGCCGGTCAAAAGGGCTGTTCTTGAGCTTGTGGAT 362078 Query 6844 CACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGA--TAC 6901 ||| | ||||||||| | ||||| ||| ||||| | | || | | || ||| Sbjct 362079 CACCTCGGCCAGCTGGTCGACGCCCTGGCCCTGGTAGTCGG-TGCGGGCGTC-GACGTAC 362136 Query 6902 TCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGA 6961 || || || ||||| | ||||||||| || ||||| || |||| |||||| |||| || Sbjct 362137 TCGGCGCCGAAGTGGCGCCACTGGAAGCCATAGACGGGACCCAGGTCGCCGACCTCGCGG 362196 Query 6962 GATGGG---AACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 ||| | || |||| ||| || || || || || |||| ||||||||||||| Sbjct 362197 --TGGCCCAAGCCGACGCT-GTCGAGGAACTCGCGCGAGCCGTTGCCGTCCCAGATCTTG 362253 Query 7019 ACCCCC 7024 || ||| Sbjct 362254 ACGCCC 362259 Score = 93.3 bits (102), Expect = 4e-14 Identities = 208/306 (68%), Gaps = 10/306 (3%) Strand=Plus/Minus Query 34321 gggggTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTT--- 34377 ||| || ||||||||||||| |||| || || || || || ||| |||| || | Sbjct 362259 GGGCGTCAAGATCTGGGACGGCAACGGCTCGCGCGAGTTCCTCGAC-AGCGTCGGCTTGG 362201 Query 34378 CCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGG 34437 ||| || |||| |||||| |||| || ||||| || ||||||||| | ||||| || Sbjct 362200 GCCA--CCGCGAGGTCGGCGACCTGGGTCCCGTCTATGGCTTCCAGTGGCGCCACTTCGG 362143 Query 34438 GGCGGAGTA--TCGGGGGAGCGAAGCGGACTATTCGGGACAGGGAGCGGACCAGCTGCAG 34495 || ||||| || | | || | | ||||| ||| ||||| | ||||||||| Sbjct 362142 CGCCGAGTACGTC-GACGCCCGCA-CCGACTACCAGGGCCAGGGCGTCGACCAGCTGGCC 362085 Query 34496 TACGTGATCGACACCTTGAAGCGGAACCCTGATGACAGAAGGATCGTGATGTGCGCGTGG 34555 | |||||| ||| | ||| | |||| |||| | | ||| | |||| || ||| Sbjct 362084 GAGGTGATCCACAAGCTCAAGAACAGCCCTTTTGACCGGCGCATCATCATGTCAGCCTGG 362025 Query 34556 AACCCGAAGGATCTCCCTCTGATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTAC 34615 ||||||| || || |||||| || || || ||||||| | ||| |||||| Sbjct 362024 AACCCGAGCGACATCAAGAAGATGGCCCTTCCGCCCTGCCACATGTTTGCCCAGTTCTAC 361965 Query 34616 GTCGCG 34621 ||| || Sbjct 361964 GTCTCG 361959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448261990960560