Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq43 167 5e-36 seq46 141 2e-28 >seq43 Length=2457951 Score = 167 bits (184), Expect = 5e-36 Identities = 166/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| ||||||||||| || |||||||| || || ||||| | ||||| Sbjct 2352944 AGGACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCC 2352885 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| ||||| || ||||| || || | || ||||||||| Sbjct 2352884 TCGAGCTGCTTGCCAGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC 2352825 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| || |||||||| || || ||||| || ||||| ||| Sbjct 2352824 TGGATCTTGGACTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCAAGGGTGATAGTC 2352765 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || |||||||| ||||| || || | |||||| || Sbjct 2352764 TTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTT 2352730 Score = 120 bits (132), Expect = 7e-22 Identities = 120/156 (77%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| || ||| ||| || |||||||| || || | ||||| | || || Sbjct 65848 AGGACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGACCGTCC 65789 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 ||||||||||| || || |||||||| || || ||||| ||||| | || ||||||||| Sbjct 65788 TCCAGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 65729 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAG 211058 |||||||| ||||| || ||||||||||| ||| Sbjct 65728 TGGATCTTGGACTTCACATTGTCGATGGTGTCGGAG 65693 Score = 100 bits (110), Expect = 7e-16 Identities = 186/270 (69%), Gaps = 6/270 (2%) Strand=Plus/Plus Query 178093 GTTCTTTTGGTTGCTCTTTC---TGCAAATGGCATCTTTGTACGCAATGAAGGGCATTCC 178149 |||||| ||||||||||| | |||| ||| || ||||| || || || | || Sbjct 1097055 GTTCTTCTGGTTGCTCTTGCGGTTGCAG-TGG--TCCTTGTAGAGCATAAATGGGTTACC 1097111 Query 178150 CACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAGTCTTTTT 178209 ||| | |||||| | || ||| | |||||||| ||| || |||| ||||| Sbjct 1097112 AGTCTCGGTCTGAGCCTCAAGGATGGAGTACCAAAGCTTCTGAGCGCGGATCGTCTTGCG 1097171 Query 178210 GGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCATAGACATC 178269 | | || || ||||||||||| | ||| || ||||||||||| || ||||| || Sbjct 1097172 GCCGCGACCCTCCTTCTCGTACTTCTCGTACAGGGCCTCGAATTCCTCGCCGTAGACGTC 1097231 Query 178270 ATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCTTCACTCG 178329 | | || ||||| ||| ||||||| | ||| |||| | |||| | || || || Sbjct 1097232 AGCCAGGCCGGGGCACTCGCTGGGGCACATGAGCGTCCAGTCGCCGTTCTTCTCAACACG 1097291 Query 178330 TTTCATGAAGAGGTCAGAGGTCCAGATGGC 178359 |||||||||||||| | |||||| ||| Sbjct 1097292 CTTCATGAAGAGGTCGGGAATCCAGAGGGC 1097321 Score = 96.9 bits (106), Expect = 8e-15 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 210987 AGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCG 211046 || || || ||||| ||||| | || ||||||||||||||||| ||||| || ||| Sbjct 65689 AGACGCTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCG 65630 Query 211047 ATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGA 211092 |||||||| ||| ||||||||||| ||||| |||||||| |||| Sbjct 65629 ATGGTGTCGGAGGACTCAACCTCGAGGGTGATGGTCTTTCCGGTGA 65584 >seq46 Length=2353920 Score = 141 bits (156), Expect = 2e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||| || || ||||| || |||||||| || || | ||||| | || || Sbjct 1617594 AGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCC 1617653 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || |||||||| || |||||||| |||||||| ||||| ||||| | || || |||||| Sbjct 1617654 TCAAGCTGCTTTCCAGCGAAGATCAGGCGTTGCTGGTCCGGAGGGATGCCCTCTTTGTCC 1617713 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || || || ||||| || || ||||| || ||||| ||| Sbjct 1617714 TGGATCTTGGACTTGACATTGTCAATAGTGTCCGAAGACTCGACCTCAAGGGTGATGGTC 1617773 Query 211083 TTTCCCGTGAGAGTCTTTACAAA 211105 || ||||| || ||||| || || Sbjct 1617774 TTGCCCGTCAGGGTCTTCACGAA 1617796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159150915830645