Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq54 129 4e-25 >seq54 Length=438711 Score = 129 bits (142), Expect = 4e-25 Identities = 153/205 (75%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 27105 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTA 27164 ||| |||| | || || | ||| ||||| |||| ||| | || ||||| || ||||| Sbjct 361665 GGGGAAGGCACGCGGTTCACGCTCCAGCTGCGTCTCCAGGGCCTCGACGTGGTCAAGGTA 361724 Query 27165 GACGTGAGCGTCTCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAG 27223 |||||| || ||||||| | ||| | || ||| || ||| | || || |||||| | Sbjct 361725 GACGTGTGCATCTCCCATGACGTGCGTCAGGCTC-CCGGGTACGAGATCGCAGACGTGGG 361783 Query 27224 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGT 27283 | ||||||| || || || | ||||||||||||||| ||||| || || || ||||| | Sbjct 361784 CGATCATGTGGGTTAGCAGGGCGTAGCTGGCGATGTTGAAGGGGACGCCCAGACCCATAT 361843 Query 27284 CCCCCGACCTCTGGTAGAGCTGACA 27308 | | |||||||||||| ||||| || Sbjct 361844 CGCACGACCTCTGGTACAGCTGGCA 361868 Score = 89.7 bits (98), Expect = 4e-13 Identities = 192/286 (67%), Gaps = 6/286 (2%) Strand=Plus/Plus Query 27348 GTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 27407 |||||| || ||||| ||||| | ||| | ||||||||||| ||| |||||| Sbjct 361983 GTGGCAGGGCGGAAGGGCCATCTTCTTGATGTCGCTCGGGTTCCAGGCTGACATGATGAT 362042 Query 27408 GCGCCTGTCTTCTGGGTTGTTCCTGA---TGAGGTCCACGGCGTTTTGCAGCTGATCCAC 27464 ||||| ||| ||| ||||| ||| || || ||| || |||||| || || Sbjct 362043 GCGCCGGTCAAAAGGGCTGTTCTTGAGCTTGTGGATCACCTCGGC---CAGCTGGTCGAC 362099 Query 27465 CCCCATCCCCGAGTAGTCTACCCTCATGTCCGTGTACTCTGCTCCGAAATGCCTCCATTG 27524 ||| ||| |||||| | ||| |||||| || ||||| || | ||| || Sbjct 362100 GCCCTGGCCCTGGTAGTCGGTGCGGGCGTCGACGTACTCGGCGCCGAAGTGGCGCCACTG 362159 Query 27525 GAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAA 27584 ||| || || || || |||||||| || | || | ||| | ||||| |||| | Sbjct 362160 GAAGCCATAGACGGGACCCAGGTCGCCGACCTCGCGGTGGCCCAAGCCGACGCTGTCGAG 362219 Query 27585 AAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 27630 || || | || |||||| ||||||||||||| || ||| |||| Sbjct 362220 GAACTCGCGCGAGCCGTTGCCGTCCCAGATCTTGACGCCCGCCTCG 362265 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369506871254063