Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20morbida_20[genbank_20GCA_5F900108815.1_202016-10-28] 73 sequences; 26,549,069 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq46 145 2e-29 seq43 138 3e-27 >seq46 Length=2353920 Score = 145 bits (160), Expect = 2e-29 Identities = 152/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989 |||||||| || || || || || || |||||||| ||||| || || ||||| || Sbjct 1617796 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTTGAGGTCGAGTCTTCGGACACTATT 1617737 Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049 || || ||||| ||||| ||||||||||| || |||||||||||||||||||| || Sbjct 1617736 GACAATGTCAAGTCCAAGATCCAGGACAAAGAGGGCATCCCTCCGGACCAGCAACGCCTG 1617677 Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAA 178109 |||||||| ||||| ||||| || || || | || || |||| || ||| |||| || Sbjct 1617676 ATCTTCGCTGGAAAGCAGCTTGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAG 1617617 Query 178110 GAATCAACACTGCATCTTGT 178129 || || || ||||| || || Sbjct 1617616 GAGTCGACCCTGCACCTGGT 1617597 >seq43 Length=2457951 Score = 138 bits (152), Expect = 3e-27 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || |||||||| |||||||| || ||| Sbjct 2352736 CAGATCTTCGTCAAGACCCTCACGGGGAAGACTATCACCCTTGAGGTGGAGTCTTCCGAC 2352795 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || |||||||| ||||| |||||||| || || ||||| ||||||||||| Sbjct 2352796 ACCATTGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCAGCAG 2352855 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || |||||||| ||||| | || || ||| || ||| || Sbjct 2352856 CGCCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAACATC 2352915 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || || || Sbjct 2352916 CAGAAGGAGTCCACTCTCCACCTGGT 2352941 Score = 96.9 bits (106), Expect = 8e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 177928 TTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCA 177987 |||| | ||||| |||| ||||| || |||||||||||||| || ||| ||||||| Sbjct 65569 TTTTGTTCAAAACAGTCACCGGAAAGACCATCACCCTCGAGGTTGAGTCCTCCGACACCA 65628 Query 177988 TCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGAC 178047 |||| || || || ||||| |||||||| || || |||||||| |||||||| || | Sbjct 65629 TCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTC 65688 Query 178048 T 178048 | Sbjct 65689 T 65689 Score = 95.1 bits (104), Expect = 3e-14 Identities = 102/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 177977 CTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGA 178036 ||| ||||||||||| || || || ||||| |||||||| || || |||||||| || Sbjct 65693 CTCCGACACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGCATCCCTCCCGA 65752 Query 178037 CCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTA 178096 |||||| || |||||||| || || || ||||| || || || | || || |||| || Sbjct 65753 CCAGCAGCGTCTTATCTTTGCTGGTAAGCAGCTGGAGGACGGTCGCACCCTGTCCGACTA 65812 Query 178097 TAACGTCCAAAAAGA 178111 ||| |||| || || Sbjct 65813 CAACATCCAGAAGGA 65827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730074135162