Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06-
24] 320 sequences; 30,069,354 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq25 197 1e-45
seq64 165 8e-36
seq56 145 8e-30
seq10 145 8e-30
>seq25
Length=1334681
Score = 197 bits (218), Expect = 1e-45
Identities = 215/285 (75%), Gaps = 3/285 (1%)
Strand=Plus/Plus
Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695
|| |||| |||||||| ||||||||||| || |||||||| | ||||||| | ||||||
Sbjct 1179578 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACTGCCGAGGAGATTGACCTG 1179637
Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752
||||||||| ||||||| | ||| | ||||| ||||| ||||||
Sbjct 1179638 TCCAAGGACCTCCACGACTGGAACAACCGCATCAACGATGACGAGAAGTTCTTCATCTCT 1179697
Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812
||| | || ||||| ||||||||| |||||||| ||||||||||| ||||||||||||
Sbjct 1179698 CACATCCTTGCCTTCTTCGCCGCCTCTGACGGCATTGTCAACGAGAACCTGGTCGAGCGT 1179757
Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872
||| ||||| ||| | ||||||| || |||||||||||||| |||||| |||
Sbjct 1179758 TTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGCTGCTTCTACGGCTTCCAGATCATGATG 1179817
Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917
|||||| | |||||||| | ||| || ||||| ||| | |||
Sbjct 1179818 GAGAACATCCACTCGGAGACGTACTCTCTGCTCATTGACTCCTAC 1179862
Score = 190 bits (210), Expect = 2e-43
Identities = 316/454 (70%), Gaps = 2/454 (0%)
Strand=Plus/Plus
Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041
|||||||||| ||||| | | |||||| | | | || || |||||| | ||||||
Sbjct 1179986 AGAAGGCCGACTGGGCCATCAGGTGGATCCAGGACCGTGACTCCACCTTCGCCCAGCGCC 1180045
Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101
|||| || || || |||||||||||| ||||||| ||| |||||| |||| || |
Sbjct 1180046 TGGTTGCATTTGCTGCCGTCGAGGGCATCTTCTTCAGCGGCGCCTTCGCCTCCATCTTCT 1180105
Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161
|||||||||| || || || |||||||||||||| ||| |||||||||||| || | |
Sbjct 1180106 GGCTCAAGAAGCGTGGTCTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATTTCGCGTG 1180165
Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221
|||||||||| || |||||| ||||| ||||| | ||| | ||| || | |
Sbjct 1180166 ACGAGGGTCTCCACACCGACTTCGCCTGCCTGCTGCACTCGCACCTCAAGCACCGCGCCA 1180225
Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281
|| | | | || |||||| |||| ||||| ||| |||||| || |||||||
Sbjct 1180226 GCAAGCAGATCATCCACGAGATCATCACTGACGCCGTCAAGATCGAGAAGGAGTTCCTCA 1180285
Query 117282 CCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATC 117340
| || || ||||| |||| || || || | || | ||| ||| |||||
Sbjct 1180286 CTGACGCCCTGCC-TTGCGCCCTACTCGGCATGAACGCCTCCCTCATGCAGCAGTACATT 1180344
Query 117341 GAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCC 117400
||||| |||||||| | || || ||| || | | || ||| |||||| | ||
Sbjct 1180345 GAGTTTGTCGCCGATCGCCTCCTTGTCGCCCTCGGCAACGAGAAGGTCTACAATGCCACC 1180404
Query 117401 AACCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434
||||| | ||||| ||| | ||||||| |||
Sbjct 1180405 AACCCCTTCGACTTCATGGAGAACATCTCCCTGG 1180438
>seq64
Length=1576225
Score = 165 bits (182), Expect = 8e-36
Identities = 179/235 (76%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746
|| ||||| || ||||| || || |||||||| || || |||||| |||| || || |
Sbjct 136704 AAGATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACTATCACCCTCGAGGTGGAGTCT 136645
Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805
|||||| | | | |||| ||||| || || | ||||| ||||| |||||| ||||
Sbjct 136644 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGA 136586
Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865
|||||| || || |||| ||| ||||| ||||| || || | ||||| || | ||||||
Sbjct 136585 CCAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTGAGCGACTA 136526
Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGGC 40920
|||||||||||||||| |||| || || || ||| ||||| || | || ||||||
Sbjct 136525 CAACATCCAGAAGGAGTCCACTCTCCACCTGGTGCTGCGCCTGCGTGGTGGCGGC 136471
>seq56
Length=2470257
Score = 145 bits (160), Expect = 8e-30
Identities = 152/200 (76%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758
||||| || || || |||||||| ||||||||| |||| ||||| || | |||| | |
Sbjct 880579 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATC 880638
Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818
| | ||||| || || | ||||| |||||||| ||| |||||||||| || ||
Sbjct 880639 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTG 880698
Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878
|||| ||| || || ||||| || |||| |||||||| |||||||||||||||||||
Sbjct 880699 ATCTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAG 880758
Query 40879 GAGGCCACGCTGCATCTAGT 40898
||| | || ||||| || ||
Sbjct 880759 GAGTCGACCCTGCACCTGGT 880778
>seq10
Length=2758267
Score = 145 bits (160), Expect = 8e-30
Identities = 171/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || |||||||| ||||| || ||||| | || || ||| | | |
Sbjct 926599 ATGCAGATTTTCGTCAAGACGCTCACTGGCAAGACGATCACGCTTGAGGTGGAATCGAGC 926658
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| ||||| || |||| ||||| |||||||| ||| |||||||
Sbjct 926659 GACACCATTGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCA 926717
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || |||| || || || ||||| || |||| |||||||| ||||||||
Sbjct 926718 GCAGCGTCTTATCTTTGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTGTCGGACTACAA 926777
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917
|||||||||||| |||| || || || || | ||| || |||| |||
Sbjct 926778 CATCCAGAAGGAATCCACCCTCCACCTGGTCCTCCGCCTGCGGGGTGGC 926826
Score = 125 bits (138), Expect = 7e-24
Identities = 142/188 (76%), Gaps = 2/188 (1%)
Strand=Plus/Plus
Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770
|||| ||||| |||||||| | || ||||| || |||||| | | | |||| |||||
Sbjct 925937 TCACTGGCAAGACCATCACTCTTGAGGTCGAGTCCTCCGACACCATCGACAACG-TCAAG 925995
Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830
|| || | ||||| |||||||| || | |||||||| || ||||| | ||| |||
Sbjct 925996 TCCAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTCTCATTTTCGCTGGC 926055
Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890
|| ||||| || |||| ||||| ||| |||||||||||||||||||||| ||| ||
Sbjct 926056 AAGCAGCTTGAGGACGGCCGCACGCTCTCCGACTACAACATCCAGAAGGAGAGCACTCTC 926115
Query 40891 CATCTAGT 40898
|| || ||
Sbjct 926116 CACCTCGT 926123
Score = 123 bits (136), Expect = 3e-23
Identities = 155/210 (74%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| || || || ||||| || || ||||| |||| ||||| | |
Sbjct 926143 ATGCAGATCTTCGTCAAGACCCTGACGGGTAAGACTATCACGCTCGAGGTCGAGTCGTCG 926202
Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | | | |||| ||||| || || | ||||| ||||| |||||| |||||||
Sbjct 926203 GACACCATCGACAACG-TCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 926261
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
||| || || |||| || || || ||||| || || | || || || | |||||||||
Sbjct 926262 GCAGCGCCTGATCTTTGCCGGAAAGCAGCTTGAGGATGGCCGTACTCTGAGCGACTACAA 926321
Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
||||||||||||| | ||||| || || ||
Sbjct 926322 CATCCAGAAGGAGTCGACGCTTCACCTCGT 926351
Score = 98.7 bits (108), Expect = 1e-15
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || || || || || || || || || ||||||||| |||| || || | |
Sbjct 926371 ATGCAGATCTTTGTCAAGACCCTGACCGGAAAGACCATCACCCTCGAGGTGGAGTCTTCG 926430
Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809
|| | | | | ||||| || |||| ||||| ||||| ||||| ||||||||
Sbjct 926431 GATACTATCGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGTATCCCTCCGGACCAG 926490
Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869
|| || || || | ||| || || ||||| || || | || || || | |||||||||
Sbjct 926491 CAGCGCCTGATTTTCGCCGGAAAGCAGCTCGAGGATGGCCGTACTCTGAGTGACTACAAC 926550
Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898
|| ||||||||| | || ||||| || ||
Sbjct 926551 ATTCAGAAGGAGTCGACTCTGCACCTGGT 926579
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515217139123200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |