Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06- 24] 320 sequences; 30,069,354 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq25 197 1e-45 seq64 165 8e-36 seq56 145 8e-30 seq10 145 8e-30 >seq25 Length=1334681 Score = 197 bits (218), Expect = 1e-45 Identities = 215/285 (75%), Gaps = 3/285 (1%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||||||||| || |||||||| | ||||||| | |||||| Sbjct 1179578 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACTGCCGAGGAGATTGACCTG 1179637 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||||||| ||||||| | ||| | ||||| ||||| |||||| Sbjct 1179638 TCCAAGGACCTCCACGACTGGAACAACCGCATCAACGATGACGAGAAGTTCTTCATCTCT 1179697 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||| | || ||||| ||||||||| |||||||| ||||||||||| |||||||||||| Sbjct 1179698 CACATCCTTGCCTTCTTCGCCGCCTCTGACGGCATTGTCAACGAGAACCTGGTCGAGCGT 1179757 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| ||||| ||| | ||||||| || |||||||||||||| |||||| ||| Sbjct 1179758 TTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGCTGCTTCTACGGCTTCCAGATCATGATG 1179817 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTAC 116917 |||||| | |||||||| | ||| || ||||| ||| | ||| Sbjct 1179818 GAGAACATCCACTCGGAGACGTACTCTCTGCTCATTGACTCCTAC 1179862 Score = 190 bits (210), Expect = 2e-43 Identities = 316/454 (70%), Gaps = 2/454 (0%) Strand=Plus/Plus Query 116982 AGAAGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCC 117041 |||||||||| ||||| | | |||||| | | | || || |||||| | |||||| Sbjct 1179986 AGAAGGCCGACTGGGCCATCAGGTGGATCCAGGACCGTGACTCCACCTTCGCCCAGCGCC 1180045 Query 117042 TGGTGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTT 117101 |||| || || || |||||||||||| ||||||| ||| |||||| |||| || | Sbjct 1180046 TGGTTGCATTTGCTGCCGTCGAGGGCATCTTCTTCAGCGGCGCCTTCGCCTCCATCTTCT 1180105 Query 117102 GGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGG 117161 |||||||||| || || || |||||||||||||| ||| |||||||||||| || | | Sbjct 1180106 GGCTCAAGAAGCGTGGTCTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATTTCGCGTG 1180165 Query 117162 ACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGA 117221 |||||||||| || |||||| ||||| ||||| | ||| | ||| || | | Sbjct 1180166 ACGAGGGTCTCCACACCGACTTCGCCTGCCTGCTGCACTCGCACCTCAAGCACCGCGCCA 1180225 Query 117222 GCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCA 117281 || | | | || |||||| |||| ||||| ||| |||||| || ||||||| Sbjct 1180226 GCAAGCAGATCATCCACGAGATCATCACTGACGCCGTCAAGATCGAGAAGGAGTTCCTCA 1180285 Query 117282 CCGAAGCGCTGCCGGTGCG-TCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATC 117340 | || || ||||| |||| || || || | || | ||| ||| ||||| Sbjct 1180286 CTGACGCCCTGCC-TTGCGCCCTACTCGGCATGAACGCCTCCCTCATGCAGCAGTACATT 1180344 Query 117341 GAGTTCGTCGCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCC 117400 ||||| |||||||| | || || ||| || | | || ||| |||||| | || Sbjct 1180345 GAGTTTGTCGCCGATCGCCTCCTTGTCGCCCTCGGCAACGAGAAGGTCTACAATGCCACC 1180404 Query 117401 AACCCGCTGGACTTTATGAACCTCATCTCCTTGG 117434 ||||| | ||||| ||| | ||||||| ||| Sbjct 1180405 AACCCCTTCGACTTCATGGAGAACATCTCCCTGG 1180438 >seq64 Length=1576225 Score = 165 bits (182), Expect = 8e-36 Identities = 179/235 (76%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || ||||| || || |||||||| || || |||||| |||| || || | Sbjct 136704 AAGATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACTATCACCCTCGAGGTGGAGTCT 136645 Query 40747 ACCGACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGA 40805 |||||| | | | |||| ||||| || || | ||||| ||||| |||||| |||| Sbjct 136644 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGA 136586 Query 40806 CCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 40865 |||||| || || |||| ||| ||||| ||||| || || | ||||| || | |||||| Sbjct 136585 CCAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTGAGCGACTA 136526 Query 40866 CAACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGGC 40920 |||||||||||||||| |||| || || || ||| ||||| || | || |||||| Sbjct 136525 CAACATCCAGAAGGAGTCCACTCTCCACCTGGTGCTGCGCCTGCGTGGTGGCGGC 136471 >seq56 Length=2470257 Score = 145 bits (160), Expect = 8e-30 Identities = 152/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 40699 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTG 40758 ||||| || || || |||||||| ||||||||| |||| ||||| || | |||| | | Sbjct 880579 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATC 880638 Query 40759 CAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTC 40818 | | ||||| || || | ||||| |||||||| ||| |||||||||| || || Sbjct 880639 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTG 880698 Query 40819 ATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAG 40878 |||| ||| || || ||||| || |||| |||||||| ||||||||||||||||||| Sbjct 880699 ATCTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAG 880758 Query 40879 GAGGCCACGCTGCATCTAGT 40898 ||| | || ||||| || || Sbjct 880759 GAGTCGACCCTGCACCTGGT 880778 >seq10 Length=2758267 Score = 145 bits (160), Expect = 8e-30 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || |||||||| ||||| || ||||| | || || ||| | | | Sbjct 926599 ATGCAGATTTTCGTCAAGACGCTCACTGGCAAGACGATCACGCTTGAGGTGGAATCGAGC 926658 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || |||| ||||| |||||||| ||| ||||||| Sbjct 926659 GACACCATTGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCA 926717 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| || || || ||||| || |||| |||||||| |||||||| Sbjct 926718 GCAGCGTCTTATCTTTGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTGTCGGACTACAA 926777 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGC 40917 |||||||||||| |||| || || || || | ||| || |||| ||| Sbjct 926778 CATCCAGAAGGAATCCACCCTCCACCTGGTCCTCCGCCTGCGGGGTGGC 926826 Score = 125 bits (138), Expect = 7e-24 Identities = 142/188 (76%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 40712 TCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAG 40770 |||| ||||| |||||||| | || ||||| || |||||| | | | |||| ||||| Sbjct 925937 TCACTGGCAAGACCATCACTCTTGAGGTCGAGTCCTCCGACACCATCGACAACG-TCAAG 925995 Query 40771 GAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGC 40830 || || | ||||| |||||||| || | |||||||| || ||||| | ||| ||| Sbjct 925996 TCCAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTCTCATTTTCGCTGGC 926055 Query 40831 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTG 40890 || ||||| || |||| ||||| ||| |||||||||||||||||||||| ||| || Sbjct 926056 AAGCAGCTTGAGGACGGCCGCACGCTCTCCGACTACAACATCCAGAAGGAGAGCACTCTC 926115 Query 40891 CATCTAGT 40898 || || || Sbjct 926116 CACCTCGT 926123 Score = 123 bits (136), Expect = 3e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || || ||||| || || ||||| |||| ||||| | | Sbjct 926143 ATGCAGATCTTCGTCAAGACCCTGACGGGTAAGACTATCACGCTCGAGGTCGAGTCGTCG 926202 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| ||||| || || | ||||| ||||| |||||| ||||||| Sbjct 926203 GACACCATCGACAACG-TCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACCA 926261 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| || || || ||||| || || | || || || | ||||||||| Sbjct 926262 GCAGCGCCTGATCTTTGCCGGAAAGCAGCTTGAGGATGGCCGTACTCTGAGCGACTACAA 926321 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| | ||||| || || || Sbjct 926322 CATCCAGAAGGAGTCGACGCTTCACCTCGT 926351 Score = 98.7 bits (108), Expect = 1e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || || || || || ||||||||| |||| || || | | Sbjct 926371 ATGCAGATCTTTGTCAAGACCCTGACCGGAAAGACCATCACCCTCGAGGTGGAGTCTTCG 926430 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | ||||| || |||| ||||| ||||| ||||| |||||||| Sbjct 926431 GATACTATCGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGTATCCCTCCGGACCAG 926490 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || || | ||| || || ||||| || || | || || || | ||||||||| Sbjct 926491 CAGCGCCTGATTTTCGCCGGAAAGCAGCTCGAGGATGGCCGTACTCTGAGTGACTACAAC 926550 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || ||||||||| | || ||||| || || Sbjct 926551 ATTCAGAAGGAGTCGACTCTGCACCTGGT 926579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515217139123200