Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06- 24] 320 sequences; 30,069,354 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq10 131 2e-25 seq64 113 5e-20 seq56 96.9 4e-15 >seq10 Length=2758267 Score = 131 bits (144), Expect = 2e-25 Identities = 148/193 (77%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052 ||||| || || ||||| || | ||| || || |||| || |||||||||||||| || Sbjct 926789 TCCTTCTGGATGTTGTAGTCCGACAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAG 926730 Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 43111 || || ||||||||||| | || | || |||||||||| ||| | || | |||| ||| Sbjct 926729 ATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC-TGAATCTTGGACTTGA-CGT 926672 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||||||||||||||| || | |||||| || ||||| || |||||||| | Sbjct 926671 TGTCAATGGTGTCGCTCGATTCCACCTCAAGCGTGATCGTCTTGCCAGTGAGCGTCTTGA 926612 Query 43171 CAAAGATTTGCAT 43183 | || || ||||| Sbjct 926611 CGAAAATCTGCAT 926599 Score = 102 bits (112), Expect = 9e-17 Identities = 140/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| ||||| ||||| ||| |||||| || | || || |||||||| || ||||| Sbjct 926562 CTCCTTCTGAATGTTGTAGTCACTCAGAGTACGGCCATCCTCGAGCTGCTTTCCGGCGAA 926503 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || || ||||||||||| | || | | |||||||||| ||| | || | |||| Sbjct 926502 AATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCC-TGAATCTTCGACTTGACAT 926444 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | || || || ||||| |||| |||||||| || || || || ||||| | Sbjct 926443 TGTCGATAGTATCCGAAGACTCCACCTCGAGGGTGATGGTCTTTCCGGTCAGGGTCTTGA 926384 Query 43171 CAAAGATTTGCAT 43183 ||||||| ||||| Sbjct 926383 CAAAGATCTGCAT 926371 Score = 100 bits (110), Expect = 3e-16 Identities = 128/174 (74%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 42987 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 43046 ||||||||||| || || ||||| || | || || || |||| || |||||||| ||| Sbjct 926111 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCA 926052 Query 43047 GCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTG 43106 ||||| ||||| ||||||||||| | || | || |||||||||| ||| || ||| Sbjct 926051 GCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 925992 Query 43107 AGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 | ||| | | | |||||| || || || || | |||||||| ||||| || Sbjct 925991 A-CGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTGCCAGT 925939 Score = 98.7 bits (108), Expect = 1e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || |||||| || | || || |||||||| || || || Sbjct 926334 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCAAGCTGCTTTCCGGCAAA 926275 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||| | || | | |||||||||| ||| || |||| ||| Sbjct 926274 GATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGCTCTTGA-CGT 926216 Query 43112 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 | | | ||||| ||| || || |||| |||||| || || ||||| || ||||| | Sbjct 926215 TGTCGATGGTGTCCGACGACTCGACCTCGAGCGTGATAGTCTTACCCGTCAGGGTCTTGA 926156 Query 43171 CAAAGATTTGCAT 43183 | ||||| ||||| Sbjct 926155 CGAAGATCTGCAT 926143 >seq64 Length=1576225 Score = 113 bits (124), Expect = 5e-20 Identities = 158/219 (72%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 42969 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 43028 |||| ||||| || | ||| |||||| || || ||||| || |||||| || | Sbjct 136487 CGCAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCA 136546 Query 43029 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 43088 || || |||||||| |||||||| || || ||||||||||| | || | | ||||||| Sbjct 136547 TCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTG 136606 Query 43089 TCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGAT 43147 ||| ||| || |||| ||| | | | |||||| || ||||| |||| ||||| Sbjct 136607 TCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGAT 136665 Query 43148 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 || || ||||| || ||||| || ||||| ||||| || Sbjct 136666 AGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTT 136704 >seq56 Length=2470257 Score = 96.9 bits (106), Expect = 4e-15 Identities = 131/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| || | ||| || || |||| || |||||||| || ||||| Sbjct 880761 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAA 880702 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || || ||||||||||| | || | || |||||||||| ||| || |||| | Sbjct 880701 GATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 880642 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | ||||| || || || |||| |||||||| |||||||| || ||||| || Sbjct 880641 GTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 880582 Query 43172 AAA 43174 || Sbjct 880581 GAA 880579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571815312729600