Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06-
24] 320 sequences; 30,069,354 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq10 129 5e-25
seq64 123 2e-23
seq56 118 8e-22
>seq10
Length=2758267
Score = 129 bits (142), Expect = 5e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||| || ||||||||||||||||||||| |||| || | || ||
Sbjct 926579 ACCAGGTGCAGAGTCGACTCCTTCTGAATGTTGTAGTCACTCAGAGTACGGCCATCCTCG 926520
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || ||||||||||| |||| ||||| ||||| ||||| | ||||||||||||| |
Sbjct 926519 AGCTGCTTTCCGGCGAAAATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGA 926460
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | ||| | ||||||||| | ||| || |||||
Sbjct 926459 ATCTTCGACTTGACATTGTCGATAGTATCCGAAGACTCCACCTCGAGGGTGATGGTCTTT 926400
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| ||||| ||||| |||||||| |||||
Sbjct 926399 CCGGTCAGGGTCTTGACAAAGATCTGCAT 926371
Score = 107 bits (118), Expect = 2e-18
Identities = 146/204 (72%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| ||||| ||||||||| |||||||||||| |||| || | || || || ||
Sbjct 926346 GTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCAAGCTG 926287
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTT 45252
|||||||| || |||| ||||| ||||| || || | ||||||||||||| || ||
Sbjct 926286 CTTTCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTT 926227
Query 45253 TTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGT 45312
||| || | | | ||||| ||| ||||| | || || ||||| |||||
Sbjct 926226 GCTCTTGACGTTGTCGATGGTGTCCGACGACTCGACCTCGAGCGTGATAGTCTTACCCGT 926167
Query 45313 CAGAGTCTTCACAAAGATTTGCAT 45336
||| ||||| || ||||| |||||
Sbjct 926166 CAGGGTCTTGACGAAGATCTGCAT 926143
Score = 93.3 bits (102), Expect = 3e-14
Identities = 146/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || ||| |||||||| ||||||||||| ||| |||| |||| ||
Sbjct 926807 ACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGACCGTCCTCG 926748
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || || || || | ||||| ||||| || || | |||||||||||| |
Sbjct 926747 AGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGA 926688
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | |||||||| | || |||||||||
Sbjct 926687 ATCTTGGACTTGACGTTGTCAATGGTGTCGCTCGATTCCACCTCAAGCGTGATCGTCTTG 926628
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336
|| || || ||||| || || || |||||
Sbjct 926627 CCAGTGAGCGTCTTGACGAAAATCTGCAT 926599
Score = 86.0 bits (94), Expect = 5e-12
Identities = 86/112 (77%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 45133 GTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTG 45192
||| || |||||||||||||| |||||||||||| || ||| |||| || || ||
Sbjct 926118 GTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGGCCGTCCTCAAGCTG 926059
Query 45193 TTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCC 45244
|| || ||||| || | ||||| ||||| ||||| | ||||||||||||
Sbjct 926058 CTTGCCAGCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCC 926007
>seq64
Length=1576225
Score = 123 bits (136), Expect = 2e-23
Identities = 157/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| ||| || ||| ||||||||| |||||||||||| |||| ||| | || ||
Sbjct 136493 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCA 136552
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || || || ||||| |||| ||||| ||||| || || | |||||||||||||
Sbjct 136553 AGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 136612
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | |||| | ||||||||| | ||| || |||||
Sbjct 136613 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTC 136672
Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTTGCCT 45343
||||| || ||||| || ||||| ||||| ||||||
Sbjct 136673 CCCGTGAGGGTCTTGACGAAGATCTGCATCTTGCCT 136708
>seq56
Length=2470257
Score = 118 bits (130), Expect = 8e-22
Identities = 146/200 (73%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187
|||| |||||| || ||||||||| |||||||||||| ||| ||| |||| ||
Sbjct 880778 ACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCA 880719
Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247
|| || ||||||||||| |||| ||||| ||||| || || | ||||||||||||
Sbjct 880718 AGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 880659
Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307
|| || ||| || | | | ||||| ||| ||||| | ||| || ||||||
Sbjct 880658 ATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTG 880599
Query 45308 CCCGTCAGAGTCTTCACAAA 45327
|||||||| |||||||| ||
Sbjct 880598 CCCGTCAGGGTCTTCACGAA 880579
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395073659206720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |