Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06- 24] 320 sequences; 30,069,354 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq10 114 2e-20 seq25 87.8 2e-12 >seq10 Length=2758267 Score = 114 bits (126), Expect = 2e-20 Identities = 445/689 (65%), Gaps = 24/689 (3%) Strand=Plus/Plus Query 71974 CCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATA 72033 || || || || || || ||||| | | ||| || || | | | || || ||||| Sbjct 2184687 CCGGGGCACTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCGACACGCTTCATG 2184746 Query 72034 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 72093 ||||| || |||||||| || || | || || || | || | |||||| || || Sbjct 2184747 AAGAGGTCGGGAATCCAGAGGGCGAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTACCG 2184806 Query 72094 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 72153 ||||| || ||||||||| | | | ||| | ||||| || || | ||| ||| Sbjct 2184807 TGGTTCTTGCGGAGGTCGAGGAACTCAAAGACATCGGCGTGCCAGGGCTCGAGGTAGATG 2184866 Query 72154 GCCATAA--CTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 72211 || || | || || || ||||| || ||||| || | ||| | || ||||| || | Sbjct 2184867 --CAGAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGGGCCGTGTTGTTGT 2184924 Query 72212 AAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTC 72271 | || | || ||| || || || || ||||| | ||| ||||| |||| || ||| | Sbjct 2184925 AGACACGCAGCATGGGGATGATGCCGTTGGAGGTACCGTTGGTACCGGCAATGTAGGAGC 2184984 Query 72272 CACTGGCACGAATATTGCTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 72329 | ||||||| || | | |||| | || || || || ||| | || ||||| | Sbjct 2184985 CCGTGGCACGGATGCGGTGGACGTTGA--GGCCAATGCCACCGGCCGTCTTGGAGATCAT 2185042 Query 72330 TGCGCATCGTTTTAACG-TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 72388 || || ||| || | | | || |||||||| || || || || ||| | |||| | | Sbjct 2185043 GGCACA-CGTCTTGAGGGTGTCGTAGATGCCATCGATGCTGTCGTCCTTGATGTCGACGA 2185101 Query 72389 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 72448 | || || |||| ||| | || || || || || | ||| || || |||| Sbjct 2185102 GGAAGCACGACGACAGCTGGGCCTGGGGGGTACCGGCGTTGAAGAGGGTGGGGGAGGCGT 2185161 Query 72449 GCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAAT----AGCTGA---TTCTATA 72501 | || || | || | |||| || |||||||||||||| ||| | || | | Sbjct 2185162 GGGTGAAGTACTTGTTGGACATGAGGTTGTACGTCTCAATGACACGCTCAACGTTGT-CA 2185220 Query 72502 TCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATC 72561 |||| |||| || || ||||||||||| | ||| ||||| || | || || ||| Sbjct 2185221 CCCCA--GATG----CCGACGGCGACACGCATAATCATGTGCTGGGGGCGCTCGACAATC 2185274 Query 72562 TTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 72621 ||| || | || | || |||||| || | || || || ||||| || | ||| Sbjct 2185275 TTGCCGTTGAGCTTGAGCAGGTAGGAGCGCTCGAGGGTCTTGAAGCCAAAGTACTGGTAG 2185334 Query 72622 GAAAAGTCTCGTTCGTAAATAATAACCGA 72650 ||||| || || || | ||| |||| Sbjct 2185335 TTGAAGTCACGGTCATAGACAATGGCCGA 2185363 >seq25 Length=1334681 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/209 (69%), Gaps = 3/209 (1%) Strand=Plus/Minus Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124 || ||||| ||| ||| |||||||| || | ||| | |||||||| || || || Sbjct 1180193 CAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAAATGAGCTCGTTGGAGAAGGTCAGG 1180134 Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184 |||||||| || |||||||| || ||||| || || || || || | || |||||| Sbjct 1180133 CCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCGCCGCTGAAGAAG 1180074 Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGT 42241 || || || || || ||||| |||| || | || | | || ||| ||| || Sbjct 1180073 ATGCCCTCGACGGCAGCAAATGCAACCAGGCGCTGGGCGAAGGTGGAGTCACGGTCCTGG 1180014 Query 42242 ATCCACTTTTGAGCCCAATCGGCCTTCTT 42270 |||||| | ||||| ||||||||||| Sbjct 1180013 ATCCACCTGATGGCCCAGTCGGCCTTCTT 1179985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671136515443200