Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06-
24] 320 sequences; 30,069,354 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq10 114 2e-20
seq25 87.8 2e-12
>seq10
Length=2758267
Score = 114 bits (126), Expect = 2e-20
Identities = 445/689 (65%), Gaps = 24/689 (3%)
Strand=Plus/Plus
Query 71974 CCAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATA 72033
|| || || || || || ||||| | | ||| || || | | | || || |||||
Sbjct 2184687 CCGGGGCACTCGTTGGGGCACATGAGGGTCCAGTCGCCGTTCTTCTCGACACGCTTCATG 2184746
Query 72034 AAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCT 72093
||||| || |||||||| || || | || || || | || | |||||| || ||
Sbjct 2184747 AAGAGGTCGGGAATCCAGAGGGCGAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTACCG 2184806
Query 72094 GTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATG 72153
||||| || ||||||||| | | | ||| | ||||| || || | ||| |||
Sbjct 2184807 TGGTTCTTGCGGAGGTCGAGGAACTCAAAGACATCGGCGTGCCAGGGCTCGAGGTAGATG 2184866
Query 72154 GCCATAA--CTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 72211
|| || | || || || ||||| || ||||| || | ||| | || ||||| || |
Sbjct 2184867 --CAGAAGGCACCGGGGCGCTTGTTGCCACCCTGGTCGACGTAGCGGGCCGTGTTGTTGT 2184924
Query 72212 AAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTC 72271
| || | || ||| || || || || ||||| | ||| ||||| |||| || ||| |
Sbjct 2184925 AGACACGCAGCATGGGGATGATGCCGTTGGAGGTACCGTTGGTACCGGCAATGTAGGAGC 2184984
Query 72272 CACTGGCACGAATATTGCTAA--TTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 72329
| ||||||| || | | |||| | || || || || ||| | || ||||| |
Sbjct 2184985 CCGTGGCACGGATGCGGTGGACGTTGA--GGCCAATGCCACCGGCCGTCTTGGAGATCAT 2185042
Query 72330 TGCGCATCGTTTTAACG-TATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 72388
|| || ||| || | | | || |||||||| || || || || ||| | |||| | |
Sbjct 2185043 GGCACA-CGTCTTGAGGGTGTCGTAGATGCCATCGATGCTGTCGTCCTTGATGTCGACGA 2185101
Query 72389 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 72448
| || || |||| ||| | || || || || || | ||| || || ||||
Sbjct 2185102 GGAAGCACGACGACAGCTGGGCCTGGGGGGTACCGGCGTTGAAGAGGGTGGGGGAGGCGT 2185161
Query 72449 GCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAAT----AGCTGA---TTCTATA 72501
| || || | || | |||| || |||||||||||||| ||| | || | |
Sbjct 2185162 GGGTGAAGTACTTGTTGGACATGAGGTTGTACGTCTCAATGACACGCTCAACGTTGT-CA 2185220
Query 72502 TCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATC 72561
|||| |||| || || ||||||||||| | ||| ||||| || | || || |||
Sbjct 2185221 CCCCA--GATG----CCGACGGCGACACGCATAATCATGTGCTGGGGGCGCTCGACAATC 2185274
Query 72562 TTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 72621
||| || | || | || |||||| || | || || || ||||| || | |||
Sbjct 2185275 TTGCCGTTGAGCTTGAGCAGGTAGGAGCGCTCGAGGGTCTTGAAGCCAAAGTACTGGTAG 2185334
Query 72622 GAAAAGTCTCGTTCGTAAATAATAACCGA 72650
||||| || || || | ||| ||||
Sbjct 2185335 TTGAAGTCACGGTCATAGACAATGGCCGA 2185363
>seq25
Length=1334681
Score = 87.8 bits (96), Expect = 2e-12
Identities = 145/209 (69%), Gaps = 3/209 (1%)
Strand=Plus/Minus
Query 42065 CATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGT 42124
|| ||||| ||| ||| |||||||| || | ||| | |||||||| || || ||
Sbjct 1180193 CAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAAATGAGCTCGTTGGAGAAGGTCAGG 1180134
Query 42125 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAG 42184
|||||||| || |||||||| || ||||| || || || || || | || ||||||
Sbjct 1180133 CCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCGCCGCTGAAGAAG 1180074
Query 42185 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CACTGTCATGT 42241
|| || || || || ||||| |||| || | || | | || ||| ||| ||
Sbjct 1180073 ATGCCCTCGACGGCAGCAAATGCAACCAGGCGCTGGGCGAAGGTGGAGTCACGGTCCTGG 1180014
Query 42242 ATCCACTTTTGAGCCCAATCGGCCTTCTT 42270
|||||| | ||||| |||||||||||
Sbjct 1180013 ATCCACCTGATGGCCCAGTCGGCCTTCTT 1179985
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671136515443200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |