Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06-
24] 320 sequences; 30,069,354 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq10 167 3e-36
seq25 132 7e-26
>seq10
Length=2758267
Score = 167 bits (184), Expect = 3e-36
Identities = 345/508 (68%), Gaps = 4/508 (1%)
Strand=Plus/Minus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| ||||| || || || || || | | ||||| | || || |||||||| ||
Sbjct 2184898 CAGGGTGGCAACAAGCGCCCCGGTGCCTTCTGCATCTACCTCGAGCCCTGGCACGCCGAT 2184839
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995
|| ||||| || |||| | ||||| ||| || || |||| || ||| | |||
Sbjct 2184838 GTCTTTGAGTTCCTCGACCTCCGCAAGAACCACGGTAAGGAGGAGGTCCGCGCCCGCGAC 2184779
Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGCTAC 97055
|||| || |||||| | || || | ||||||||||| ||| | | ||| ||
Sbjct 2184778 CTGTTCCTCGCCCTCTGGATTCCCGACCTCTTCATGAAGCGTGTCGAGAAGAACGGCGAC 2184719
Query 97056 TGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAGTTT 97115
|||| ||| ||||||||| || || ||||| ||| |||| | ||||| ||||||
Sbjct 2184718 TGGACCCTCATGTGCCCCAACGAGTGCCCCGGCCTGGCCGACGTCCACGGCGACGAGTTT 2184659
Query 97116 GAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCG-ATACGTGAGACGAGTCGATGCACG 97174
||||| |||| | |||||| |||||||| || |||||| || || |
Sbjct 2184658 GAGGCTCTGTACGAGAAGTACGAGAGGGAGGGCCGCGGCCGCAAGACGA-TCCGCGC-CC 2184601
Query 97175 AGAA-CTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCTCT 97233
|||| |||||| | | ||| | ||| ||| ||||| || | || | ||| ||||
Sbjct 2184600 AGAAGCTGTGGTACTCGATCCTCGAGGCCCAGACCGAGACGGGTAACCCCTTCATGCTCT 2184541
Query 97234 ACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGCTCCA 97293
||||||| | || ||||| |||||||| || ||||||||||| ||||||
Sbjct 2184540 ACAAGGACCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGCACCATCCGCAGCTCCA 2184481
Query 97294 ATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTTCTGG 97353
| |||||||| || ||||| |||||| | | || |||||| ||| || ||| ||||
Sbjct 2184480 ACCTGTGCACCGAGATTGTCGAGTACTCTGCCCCCGACGAGGTGGCCGTCTGCAACCTGG 2184421
Query 97354 CATCGGTCAATCTGCCCAAGTTTGTAGA 97381
| ||| | ||||| |||||| ||
Sbjct 2184420 CCTCGCTGGCCCTGCCGTCGTTTGTCGA 2184393
>seq25
Length=1334681
Score = 132 bits (146), Expect = 7e-26
Identities = 342/517 (66%), Gaps = 23/517 (4%)
Strand=Plus/Plus
Query 125361 ATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCC 125420
|| ||||| ||||| | |||| || |||||||| | ||| | || | | ||||
Sbjct 1179979 ATCCGTAAGAAGGCCGACTGGGCCATCAGGTGGATCCAGGACCGTGACTCCACCTTCGCC 1180038
Query 125421 GACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCC 125480
| | ||||| ||||| || ||||| |||||||||||||| || || || ||
Sbjct 1180039 CAGCGCCTGGTTGCATTTGCTGCCGTCGAGGGCATCTTCTTCAGCGGCGCCTTCGCCTCC 1180098
Query 125481 ATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATA 125540
||||| |||||||||||||| || || |||||||| ||||| | |||||| | ||
Sbjct 1180099 ATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATT 1180158
Query 125541 TCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTG-TTTCGCAACTATCTGCG 125599
|| || |||||||| || ||| ||||| ||| || ||| ||||| ||
Sbjct 1180159 TCGCGTGACGAGGGTCTCCACACCGACTTCGCCTGCCTGCTGCACTCGCACCT------- 1180211
Query 125600 TCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAAC---ATTGTAACCGATGCCGTGAG 125656
| || | | ||||| | || ||||| || || | || || ||||| |
Sbjct 1180212 ---CAAGCACCGCGCCAGC---AAGCAGATCATCCACGAGATCATCACTGACGCCGTCAA 1180265
Query 125657 GATAGAACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAA 125716
||| || | ||||| || || || |||| || | | | | ||||||||| |
Sbjct 1180266 GATCGAGAAGGAGTTCCTCACTGACGCCCTGCCTTGCGCCCTACTCGGCATGAACGCCTC 1180325
Query 125717 GCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGATTGGC-- 125774
|| ||| ||||||| |||||||| || ||||| || || || | |||
Sbjct 1180326 CCTCATGCAGCAGTACATTGAGTTTGTCGCCGATCGCCTCCTTGTCG---CCCTCGGCAA 1180382
Query 125775 CG-CAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACTAGAGGG 125833
|| ||| | ||||| |||| || ||||| || |||||| | ||| || || | ||
Sbjct 1180383 CGAGAAGGTCTACAATGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGCGG 1180442
Query 125834 TAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTAC 125870
||||||||||| || |||||| ||| ||||||||
Sbjct 1180443 CAAGACCAACTTCTTTGAGAAGCGCGTCGGCGAGTAC 1180479
Score = 122 bits (134), Expect = 1e-22
Identities = 205/292 (70%), Gaps = 10/292 (3%)
Strand=Plus/Plus
Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078
|| ||| | |||||||| ||||| |||| || || ||||| | ||| ||| | || |||
Sbjct 1179578 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACTGCCGAGGAGATTGACCTG 1179637
Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGA----GTTTAT 125134
||||||||||| |||| ||| | | || | | || ||| ||||| || ||
Sbjct 1179638 TCCAAGGACCTCCACGACTGGAACAACCGCATCAACGA---TGA-CGAGAAGTTCTTCAT 1179693
Query 125135 ATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGAC 125194
|| ||||| | |||||||| |||| ||| || || || |||||||| || ||| |
Sbjct 1179694 CTCTCACATCCTTGCCTTCTTCGCCGCCTCTGACGGCATTGTCAACGAGAACCTGGTCGA 1179753
Query 125195 ACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCG-TGCTTTTACGGATTCCAAATCA 125253
|| ||| ||| | || || |||| ||| ||||| ||||| ||||| ||||
Sbjct 1179754 GCGTTTCAGCGGCGAGGTCCAGATCCCCGAGG-CTCGCTGCTTCTACGGCTTCCAGATCA 1179812
Query 125254 TGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACAT 125305
|||| |||||| | |||||||| | ||||||| || |||||| |||||
Sbjct 1179813 TGATGGAGAACATCCACTCGGAGACGTACTCTCTGCTCATTGACTCCTACAT 1179864
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741056235763200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |