Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06- 24] 320 sequences; 30,069,354 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq10 125 2e-23 >seq10 Length=2758267 Score = 125 bits (138), Expect = 2e-23 Identities = 146/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || ||||| ||||| || || ||||| || || || | |||||| || || || || ||| Sbjct 926795 GTGGATTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGACCGTCCTCGAGCTGCTTACCA 926736 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||| || || || || || || || || ||||||||||| | || Sbjct 926735 GCAAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTG 926676 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || || | ||| ||||| | ||| ||||| || || || ||||| ||||| || || Sbjct 926675 ACGTTGTCAATGGTGTCGCTCGATTCCACCTCAAGCGTGATCGTCTTGCCAGTGAGCGTC 926616 Query 104543 TTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 926615 TTGACGAAAATCTGCAT 926599 Score = 113 bits (124), Expect = 1e-19 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || |||||||| || |||||| ||||| | || || || || || ||||| Sbjct 926567 GTCGACTCCTTCTGAATGTTGTAGTCACTCAGAGTACGGCCATCCTCGAGCTGCTTTCCG 926508 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || ||||| || | ||| || || ||||| || || || || ||||||||||| | || Sbjct 926507 GCGAAAATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGAATCTTCGACTTG 926448 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | ||||| || || ||||| || || || ||||| || || || || Sbjct 926447 ACATTGTCGATAGTATCCGAAGACTCCACCTCGAGGGTGATGGTCTTTCCGGTCAGGGTC 926388 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 926387 TTGACAAAGATCTGCAT 926371 Score = 89.7 bits (98), Expect = 1e-12 Identities = 140/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||| ||||| | || || || || || ||||| Sbjct 926339 GTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCAAGCTGCTTTCCG 926280 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 ||||| || || | ||| || || || || || || || || ||||| ||||| ||| || Sbjct 926279 GCAAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTT-GCTCTT 926221 Query 104483 -ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541 || || || | ||| || | || ||||| || || ||||||||||| || || || Sbjct 926220 GACGTTGTCGATGGTGTCCGACGACTCGACCTCGAGCGTGATAGTCTTACCCGTCAGGGT 926161 Query 104542 TTTTACAAATATCTGCAT 104559 || || || |||||||| Sbjct 926160 CTTGACGAAGATCTGCAT 926143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151393679266560