Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06-
24] 320 sequences; 30,069,354 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq10 125 2e-23
>seq10
Length=2758267
Score = 125 bits (138), Expect = 2e-23
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| ||||| ||||| || || ||||| || || || | |||||| || || || || |||
Sbjct 926795 GTGGATTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGACCGTCCTCGAGCTGCTTACCA 926736
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || || | ||| || || || || || || || || ||||||||||| | ||
Sbjct 926735 GCAAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTG 926676
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
|| || || | ||| ||||| | ||| ||||| || || || ||||| ||||| || ||
Sbjct 926675 ACGTTGTCAATGGTGTCGCTCGATTCCACCTCAAGCGTGATCGTCTTGCCAGTGAGCGTC 926616
Query 104543 TTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 926615 TTGACGAAAATCTGCAT 926599
Score = 113 bits (124), Expect = 1e-19
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || |||||||| || |||||| ||||| | || || || || || |||||
Sbjct 926567 GTCGACTCCTTCTGAATGTTGTAGTCACTCAGAGTACGGCCATCCTCGAGCTGCTTTCCG 926508
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
|| ||||| || | ||| || || ||||| || || || || ||||||||||| | ||
Sbjct 926507 GCGAAAATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGAATCTTCGACTTG 926448
Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542
||||| || | ||||| || || ||||| || || || ||||| || || || ||
Sbjct 926447 ACATTGTCGATAGTATCCGAAGACTCCACCTCGAGGGTGATGGTCTTTCCGGTCAGGGTC 926388
Query 104543 TTTACAAATATCTGCAT 104559
|| ||||| ||||||||
Sbjct 926387 TTGACAAAGATCTGCAT 926371
Score = 89.7 bits (98), Expect = 1e-12
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422
|| || || ||||| || || ||||| ||||| | || || || || || |||||
Sbjct 926339 GTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCAAGCTGCTTTCCG 926280
Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482
||||| || || | ||| || || || || || || || || ||||| ||||| ||| ||
Sbjct 926279 GCAAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTT-GCTCTT 926221
Query 104483 -ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGT 104541
|| || || | ||| || | || ||||| || || ||||||||||| || || ||
Sbjct 926220 GACGTTGTCGATGGTGTCCGACGACTCGACCTCGAGCGTGATAGTCTTACCCGTCAGGGT 926161
Query 104542 TTTTACAAATATCTGCAT 104559
|| || || ||||||||
Sbjct 926160 CTTGACGAAGATCTGCAT 926143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151393679266560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |