Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06-
24] 320 sequences; 30,069,354 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq10 111 1e-19
seq64 100 3e-16
>seq10
Length=2758267
Score = 111 bits (122), Expect = 1e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 94799 ACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCC 94858
|||| ||||| ||| || ||||| || | ||| || || |||| ||| | ||||||
Sbjct 926579 ACCAGGTGCAGAGTCGACTCCTTCTGAATGTTGTAGTCACTCAGAGTACGGCCATCCTCG 926520
Query 94859 AGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAA 94918
||||| |||||| | || || | | ||||| || ||||| ||||| || ||||| | |
Sbjct 926519 AGCTGCTTTCCGGCGAAAATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGA 926460
Query 94919 ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTT 94978
|| || | |||||| | ||| ||| || | || || || | |||||||| |||
Sbjct 926459 ATCTTCGACTTGACATTGTCGATAGTATCCGAAGACTCCACCTCGAGGGTGATGGTCTTT 926400
Query 94979 CCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || || ||||||||||||||
Sbjct 926399 CCGGTCAGGGTCTTGACAAAGATCTGCAT 926371
Score = 98.7 bits (108), Expect = 9e-16
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 94811 GTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCG 94870
|| || ||||| || | ||| || ||||||| ||| | |||||| ||||| ||||||
Sbjct 926339 GTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCAAGCTGCTTTCCG 926280
Query 94871 CCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTG 94930
||||||| | | ||||| || || || ||||| || ||||| | || || ||||
Sbjct 926279 GCAAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGCTCTTG 926220
Query 94931 ACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990
||| | ||| ||||| | ||||| || | |||||| || || || || || ||
Sbjct 926219 ACGTTGTCGATGGTGTCCGACGACTCGACCTCGAGCGTGATAGTCTTACCCGTCAGGGTC 926160
Query 94991 TTCACAAAGATCTGCAT 95007
|| || |||||||||||
Sbjct 926159 TTGACGAAGATCTGCAT 926143
>seq64
Length=1576225
Score = 100 bits (110), Expect = 3e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852
|||| ||||| ||| | ||| || ||||| || | ||| || ||||||| |||| | |
Sbjct 136487 CGCAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCA 136546
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
||||| ||||| || || | ||||| | | ||||| || || || ||||| || |||
Sbjct 136547 TCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTG 136606
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | || || | ||||||| | ||| ||||| | || || || | |||||
Sbjct 136607 TCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATA 136666
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || || || || || || |||||||||||
Sbjct 136667 GTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 136701
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448289406835200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |