Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06- 24] 320 sequences; 30,069,354 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq93 96.9 5e-16 seq7 93.3 7e-15 >seq93 Length=1066129 Score = 96.9 bits (106), Expect = 5e-16 Identities = 84/102 (82%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||| ||| || ||||| || || ||||||||||| |||| Sbjct 461602 CGCCAAGCGTCACCGCAAGAT-TCTCAAGGACAACATTCAGGGTATCACCAAGCCCGCTA 461660 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532 |||||||||| || || |||||||| ||||||||| |||||| Sbjct 461661 TCCGTCGTCTCGCGCGCCGTGGTGGTGTCAAGCGTATCTCTG 461702 Score = 82.4 bits (90), Expect = 1e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 16565 AAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGT 16624 |||| ||||||| || ||||||| |||||| || ||| || |||||||| || || Sbjct 461803 AAGACCTTCCTCGAGGGTGTTATCCGTGATGCCGTCACCTACACTGAGCACGCCAAGCGC 461862 Query 16625 AAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTAT 16684 ||||||||||| || | || ||||||| || |||| || || ||||| | | || Sbjct 461863 AAGACTGTCACGTCGCTCGACGTCGTCTACGCTCTGAAGCGCCAGGGCCGCACCCTGTAC 461922 Query 16685 GGTTTTGGAAGTTAA 16699 ||||| || ||||| Sbjct 461923 GGTTTCGGTGGTTAA 461937 >seq7 Length=1646172 Score = 93.3 bits (102), Expect = 7e-15 Identities = 82/100 (82%), Gaps = 2/100 (2%) Strand=Plus/Minus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| |||| ||| ||| || ||||| || || || |||||||| |||| Sbjct 589895 CGCCAAGCGTCACCGCAAGAT-TCTCAAGGACAACATTCAGGGTATTACCAAGCCTGCTA 589837 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 |||||||||| || ||||||||||| ||||||||| |||| Sbjct 589836 TCCGTCGTCTCGCGCGTCGTGGTGGTGTCAAGCGTATCTC 589797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074907421760