Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06- 24] 320 sequences; 30,069,354 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq25 161 7e-35 seq226 140 2e-28 seq190 140 2e-28 >seq25 Length=1334681 Score = 161 bits (178), Expect = 7e-35 Identities = 214/295 (73%), Gaps = 4/295 (1%) Strand=Plus/Plus Query 6195 GACGCGTTCTACCGCTACAAAATGCCGCGCATCTGC--GCCAAGGTCGAGGGTAAGGGAA 6252 ||||| |||||||||||||| ||| | || ||||| ||||| ||||||||||||| | Sbjct 1217335 GACGCCTTCTACCGCTACAAGATG--GAGCGTCTGCAGACCAAGATCGAGGGTAAGGGCA 1217392 Query 6253 ACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCGCTCGGACGCCCTG 6312 |||| || || || ||| |||||||| || | |||||| || | || | ||||| | Sbjct 1217393 ACGGCATCAAGACGGTCGTTGTCAACCTGTCGAGCGTCGCTCAGTCCCTGGCCCGCCCCG 1217452 Query 6313 CCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACGCAGTTTGATCACA 6372 || || | || || || || | ||| || ||||| ||||| | |||| | || Sbjct 1217453 GAGCCCACGTCATCAAGTACTTTGGCTTCGAGCTGGGCGCCCAGACCAACATTGACCCCA 1217512 Query 6373 AAAACGAGCGCTTCATCGTTAACGGATCGCATAACTCTGCCAAGCTGCAGGACTTACTTG 6432 | |||| |||| ||| | ||||| | || |||| |||||||||||||||| || | Sbjct 1217513 AGGACGACCGCTGGATCATCAACGGCGCCCACGACTCGGCCAAGCTGCAGGACTACCTCG 1217572 Query 6433 ACGGCTTTATTCGCAAGTTTGTGCTGTGTCGGGAATGCGATAACCCGGAGACCGA 6487 ||||||| || ||||||||| ||||| | | ||| | ||||| |||||||| Sbjct 1217573 ACGGCTTCATCAACAAGTTTGTCCTGTGCAAGAAGTGCAAGAACCCCGAGACCGA 1217627 >seq226 Length=11779 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 1800 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 1859 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 1860 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1894 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 9878 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 9937 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 9938 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 9972 >seq190 Length=1588703 Score = 140 bits (154), Expect = 2e-28 Identities = 88/95 (93%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 1586802 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 1586861 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 |||||| |||||||||||||||||||||||||||| Sbjct 1586862 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1586896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334945893705920