Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06-
24] 320 sequences; 30,069,354 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq10 129 7e-25
seq25 87.8 2e-12
>seq10
Length=2758267
Score = 129 bits (142), Expect = 7e-25
Identities = 466/720 (65%), Gaps = 22/720 (3%)
Strand=Plus/Plus
Query 62993 TCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGAC 63052
|| |||||||| || || | | |||| || || || || | || ||||| | | |
Sbjct 2184657 TCAAACTCGTCGCCGTGGACGTCGGCCAGGCCGGGGCACTCGTTGGGGCACATGAGGGTC 2184716
Query 63053 CACTCTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAAT 63112
|| || |||| | || || || ||||| ||||| || |||||||| || || | ||
Sbjct 2184717 CAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAGAGGGCGAGGAAC 2184776
Query 63113 AGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATA 63172
|| || | || | ||||| || || ||||| || ||||||||| | |
Sbjct 2184777 AGGTCGCGGGCGCGGACCTCCTCCTTACCGTGGTTCTTGCGGAGGTCGAGGAACTCAAAG 2184836
Query 63173 ATATCAGAATGCCACGGTTCCAAGTATATGGCCATAA--CTCCAGGCCGTTTGTTTCCTC 63230
| ||| | ||||| || || | ||| ||| || || | || || || ||||| || |
Sbjct 2184837 ACATCGGCGTGCCAGGGCTCGAGGTAGATG--CAGAAGGCACCGGGGCGCTTGTTGCCAC 2184894
Query 63231 CCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGG 63290
|||| || | ||| | || ||||| || || || | || ||| || || || || ||||
Sbjct 2184895 CCTGGTCGACGTAGCGGGCCGTGTTGTTGTAGACACGCAGCATGGGGATGATGCCGTTGG 2184954
Query 63291 ATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAA--TTGATAG 63348
| ||||| ||||| || | || ||| || ||||||| || | |||| |
Sbjct 2184955 AGGTACCGTTGGTACCGGCAATGTAGGAGCCCGTGGCACGGATGCGGTGGACGTTGA--G 2185012
Query 63349 ACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACG-TATCATAGATGC 63407
|| || || || ||| | || ||||| | || || ||| || | | | || |||||||
Sbjct 2185013 GCCAATGCCACCGGCCGTCTTGGAGATCATGGCACA-CGTCTTGAGGGTGTCGTAGATGC 2185071
Query 63408 CCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAG 63467
| || || || || ||| | |||| | || || || |||| ||| | |
Sbjct 2185072 CATCGATGCTGTCGTCCTTGATGTCGACGAGGAAGCACGACGACAGCTGGGCCTGGGGGG 2185131
Query 63468 TTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGT 63527
| || || || || | ||| || || ||||| || || | || | || | || ||||
Sbjct 2185132 TACCGGCGTTGAAGAGGGTGGGGGAGGCGTGGGTGAAGTACTTGTTGGACATGAGGTTGT 2185191
Query 63528 ACGTCTCAAT----AGCTGA--GTCTATATCCCATTGATGAATTCCTACTGCGACACGCA 63581
|||||||||| ||| | || | |||| |||| || || ||||||||||
Sbjct 2185192 ACGTCTCAATGACACGCTCAACGTTGTCACCCCA--GATG----CCGACGGCGACACGCA 2185245
Query 63582 TTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTT 63641
| | ||||||||| || | || || |||||| ||| | || | || |||||| |
Sbjct 2185246 TAATCATGTGCTGGGGGCGCTCGACAATCTTGCCGTTGAGCTTGAGCAGGTAGGAGCGCT 2185305
Query 63642 CCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGT 63701
| | || || || ||||| || | ||| ||||| || || || | ||| ||||||
Sbjct 2185306 CGAGGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCACGGTCATAGACAATGGCCGAGT 2185365
>seq25
Length=1334681
Score = 87.8 bits (96), Expect = 2e-12
Identities = 145/209 (69%), Gaps = 3/209 (1%)
Strand=Plus/Minus
Query 32661 CATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGT 32720
|| ||||| ||| ||| ||||||||||| | ||| | |||||||| || || ||
Sbjct 1180193 CAGGCGAAGTCGGTGTGGAGACCCTCGTCACGCGAAATGAGCTCGTTGGAGAAGGTCAGG 1180134
Query 32721 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAA 32780
|||||||| || |||||||| || ||||| || ||||| || || | || |||||
Sbjct 1180133 CCGGGCATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCGCCGCTGAAGAAG 1180074
Query 32781 ATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGG---CGCTGTCATGT 32837
|| || || || || ||||| |||| || | || | | || | | ||| ||
Sbjct 1180073 ATGCCCTCGACGGCAGCAAATGCAACCAGGCGCTGGGCGAAGGTGGAGTCACGGTCCTGG 1180014
Query 32838 ATCCACTTTTGAGCCCAATCGGCCTTCTT 32866
|||||| | ||||| |||||||||||
Sbjct 1180013 ATCCACCTGATGGCCCAGTCGGCCTTCTT 1179985
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633629465472000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |