Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06-
24] 320 sequences; 30,069,354 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq10 127 2e-24
seq64 95.1 1e-14
seq56 91.5 1e-13
>seq10
Length=2758267
Score = 127 bits (140), Expect = 2e-24
Identities = 147/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||| || || || | || || || ||| |||| ||||| |||||| | | |
Sbjct 926599 ATGCAGATTTTCGTCAAGACGCTCACTGGCAAGACGATCACGCTTGAGGTGGAATCGAGC 926658
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| | |||| || ||||| ||||||||||| ||||| || || ||
Sbjct 926659 GACACCATTGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCAG 926718
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| |||||||| ||||| || || ||| | ||||| |||||| | || || ||||||
Sbjct 926719 CAGCGTCTTATCTTTGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTGTCGGACTACAAC 926778
Query 22399 ATTCAAAAAGAATCCACC 22416
|| || || |||||||||
Sbjct 926779 ATCCAGAAGGAATCCACC 926796
Score = 100 bits (110), Expect = 2e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || || | ||||| || || |||| || || ||||| | |
Sbjct 926371 ATGCAGATCTTTGTCAAGACCCTGACCGGAAAGACCATCACCCTCGAGGTGGAGTCTTCG 926430
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | ||| || |||| || ||||| |||||||||||||| || || || ||
Sbjct 926431 GATACTATCGACAATGTCAAGTCGAAGATTCAGGACAAGGAGGGTATCCCTCCGGACCAG 926490
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || || || || ||||| || ||| | |||||| ||| || | || ||||||
Sbjct 926491 CAGCGCCTGATTTTCGCCGGAAAGCAGCTCGAGGATGGCCGTACTCTGAGTGACTACAAC 926550
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| || || || || | || | ||| | || ||||||| |||
Sbjct 926551 ATTCAGAAGGAGTCGACTCTGCACCTGGTTCTCCGTCTGCGCGGTGGT 926598
Score = 98.7 bits (108), Expect = 8e-16
Identities = 122/167 (73%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
|| || || || |||||||||| || || || |||| ||| | ||| | ||||
Sbjct 925939 ACTGGCAAGACCATCACTCTTGAGGTCGAGTCCTCCGACACCATCGACAACGTCAAGTCC 925998
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || ||||||||||| ||||| || || || || ||||| || || || |||||
Sbjct 925999 AAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTCTCATTTTCGCTGGCAAG 926058
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGA 22409
||| | ||||| |||||| ||||||| |||||||| || || ||
Sbjct 926059 CAGCTTGAGGACGGCCGCACGCTCTCCGACTACAACATCCAGAAGGA 926105
>seq64
Length=1576225
Score = 95.1 bits (104), Expect = 1e-14
Identities = 141/200 (71%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||| || || || || || | || || || || |||| || || ||||| |
Sbjct 136704 AAGATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACTATCACCCTCGAGGTGGAGTCT 136645
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
|||| ||| | ||| | |||| || || || |||||||||||||| || || ||
Sbjct 136644 TCCGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGAC 136585
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || || || || || || ||||| ||| | |||||| |||||| | ||| |||
Sbjct 136584 CAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTGAGCGACTAC 136525
Query 22396 AACATTCAAAAAGAATCCAC 22415
||||| || || || |||||
Sbjct 136524 AACATCCAGAAGGAGTCCAC 136505
>seq56
Length=2470257
Score = 91.5 bits (100), Expect = 1e-13
Identities = 134/190 (71%), Gaps = 0/190 (0%)
Strand=Plus/Plus
Query 22227 TTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGT 22286
||| || || || | || || || || |||| || || || || || | || ||| |
Sbjct 880578 TTTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCAT 880637
Query 22287 GGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCT 22346
||| || |||| || || || ||||||||||| ||||| || || || || || ||
Sbjct 880638 CGACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCT 880697
Query 22347 TATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAA 22406
|| || ||||| || ||| | ||||| ||||||| | ||||| |||||||| || ||
Sbjct 880698 GATCTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAA 880757
Query 22407 AGAATCCACC 22416
|| || |||
Sbjct 880758 GGAGTCGACC 880767
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419726363060800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |