Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06- 24] 320 sequences; 30,069,354 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq4 158 2e-33 seq56 109 1e-18 seq25 96.9 7e-15 >seq4 Length=1531359 Score = 158 bits (174), Expect = 2e-33 Identities = 448/679 (66%), Gaps = 17/679 (3%) Strand=Plus/Plus Query 279692 GCCAGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCT 279751 ||| || || || ||||||||||| |||||||||||||| ||||| |||||||||| || Sbjct 465547 GCCCGTCGGCTCCCTGTCGGGTGGATGGAAGATGAAGCTTGCCCTGGCTCGCGCCATGCT 465606 Query 279752 ACTGCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGT 279811 | ||| ||||| ||||| ||||| || ||||| || |||||| ||||| ||||||| Sbjct 465607 GCAGCGCGCCGACGTCCTCCTGCTGGACGAGCCGACTAACCACCTGGACGTGGCCAACGT 465666 Query 279812 AGCCTGGCTAGTGTCCTACCTAACCAGT--CTGAAGAATGTTTCTTCCCTCATTGTCTCT 279869 |||||||| | | |||||| | ||| | | | | | | | | || || || Sbjct 465667 GGCCTGGCTGGAGAACTACCT--CAAGTCGCACACGGACATCACCAGCATGATCGTGTCC 465724 Query 279870 CACGACTCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTG 279929 |||||||| |||||||| || ||| | | | |||| ||||| ||| || | Sbjct 465725 CACGACTCGGGCTTCCTTGACAACGTCACCACCGACATCTACCACTACGAGGCCAACAAG 465784 Query 279930 AAGCTCTCCAAGCACATCGGCAACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGCGGCC 279989 ||||| || ||| ||||||||||| || || | ||||| ||||| Sbjct 465785 AAGCTGGCCTGCTACAAGGGCAACCTGTCCAAGTTTGTCGAGGTCCGCCCCGAGGCCAAG 465844 Query 279990 GCCTACTATGACCTGAAGGACGCCACCGCCAAGTGGGAATTCCCTGAGCCAGGGTTTCTG 280049 |||||| ||| || ||||| |||| ||| | |||||| || || | ||| Sbjct 465845 AGCTACTACACGCTGTCGGCCGCCAACGCCCAGTTCAAGTTCCCTCCCCCCGGTATCCTG 465904 Query 280050 GAGGGCATCACATCAAAGGATCGCGCAATCAT--GAAGCTCCGTGGCGTCTCCTTTGCTT 280107 |||||||| || || ||||| ||||| | | ||| ||| || | | Sbjct 465905 ACGGGCATCAAGTCGCAGACCCGCGCCATCATCCGCATGTCCAACGCGACT--TACCAGT 465962 Query 280108 ATCCCAATGGCCCCAA--CATC---TTCAGCAGTGTCAACTCGCAGGTTTCTATGAACTC 280162 | ||||| | |||||| | || || | ||||| | ||| | || || Sbjct 465963 ACCCCAAGGCCCCCAAGCCTTCGCTGTCCGACGTGTC--GTGCCAGCTCAGCCTGTCGTC 466020 Query 280163 ACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGAC 280222 || | | |||| || ||||| ||||| || ||||| ||||| ||||| | || || Sbjct 466021 GCGTGTGGCCATCATCGGCCCCAACGGTGCCGGCAAGTCCACCCTCATCAAGATGCTCAC 466080 Query 280223 TGGCGAGACCCAGGCCACTGAGGGGTCCGTTTG-GAAGCATCCCAACATGCGGATGGCTT 280281 || ||| || || || || | | | |||||| |||||| |||| || | | Sbjct 466081 GGGTGAG-GTCATCCCCTCGACCGGAAAGGTCGAGAAGCACCCCAACCTGCGTATCGGCT 466139 Query 280282 ACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAAT 280341 || || |||||||| || | ||| |||||| ||||| || | ||| || ||||| | Sbjct 466140 ACATCAAGCAGCACGCCCTCGAGCACGTCGAGATGCACCTTGAGAAGACGCCCAACCAGT 466199 Query 280342 ACATTCAGTGGCGCTATGC 280360 || | ||||||||||| || Sbjct 466200 ACCTCCAGTGGCGCTACGC 466218 >seq56 Length=2470257 Score = 109 bits (120), Expect = 1e-18 Identities = 159/222 (72%), Gaps = 2/222 (1%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||| ||||| |||| ||||| ||||| || |||| ||||| ||||| ||| Sbjct 501364 GGTGAGGACCTGTGCAACTGCACCTTCTCCCTCGCCTACGGTGCCAAGATCCTGCTCAAC 501305 Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464 |||| |||| ||||||||||| | || || ||||| ||||||||| || | Sbjct 501304 CAGACCCACCTCCGTCTCAAGCGTGGCCAGCGCTACGGTCTTTGCGGTCCCAACGGTTCC 501245 Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524 || ||| || || ||||| ||||| |||| ||| | || || || || || ||| Sbjct 501244 GGAAAGTCGACCCTCATGCGTGCCATCAACAACGAGCAGGTTGAGGGCTTCCCCAA-GCA 501186 Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565 || ||||| | ||| || | || ||||||||| ||||||| Sbjct 501185 GTCCGAGGTCAAGACCGTCTTCGTCGAGCACGACCTCGACTC 501144 Score = 100 bits (110), Expect = 6e-16 Identities = 115/152 (76%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731 || || | ||||| ||| ||||| | ||||||| ||||| |||||||| || || | Sbjct 499992 CCCAGTTCGGTCTCGACGCCGAGCTCGTCTCTCACTCGCGCATGCGCGGTCTCTCCGGTG 499933 Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790 ||||| ||||| |||| ||| || |||| |||||| | || ||| ||||||| Sbjct 499932 GCCAGCGTGTCAAGACTGTCCTCGCCGCTTGCTC-GTGGCAGCGTCCCCACCTGATCGTC 499874 Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGA 280822 || ||||||||||||||||| |||||||| || Sbjct 499873 CTTGACGAGCCTACCAACTACCTGGACCGTGA 499842 Score = 100 bits (110), Expect = 6e-16 Identities = 163/232 (70%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 280160 CTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCT 280219 ||| || |||| |||||||| ||||| ||||| || ||||| ||||| ||||| ||||| Sbjct 500549 CTCCCGTATTGCCGTCATTGGCCCCAACGGTGCCGGCAAGTCGACCCTCATCAACGTCCT 500490 Query 280220 GACTGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGC 280279 || || ||| | |||| |||| | | |||| ||||| || || || Sbjct 500489 CACCGGTGAGCTCATCCCCACCAAGGGTGAGATCTACCAGCACGAGAACATCCGTATTGC 500430 Query 280280 TTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCA 280339 ||| || |||||||| ||| |||||| || |||||||||||| |||||| | Sbjct 500429 CTACATCAAGCAGCACGCCTTCGCCCACATTGATAACCACCTGGACTCGACTCCCTCGGA 500370 Query 280340 ATACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCG 280390 ||||| |||||||| | | || | ||| |||||| ||| || |||| || Sbjct 500369 GTACATCCAGTGGCG-TTTCCAGACTGGTGAGGATCGTGAGACGATGGACCG 500319 >seq25 Length=1334681 Score = 96.9 bits (106), Expect = 7e-15 Identities = 278/426 (65%), Gaps = 10/426 (2%) Strand=Plus/Minus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 || ||||| || | |||||| |||| ||||| ||||||||||||||||||||| ||| Sbjct 1180460 TCAAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTG 1180401 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 |||||||| ||| | ||| || || || | || ||| || || |||||||| | Sbjct 1180400 GCATTGTAGACCTTCTCGTTGCCGAGGGCGACAAGGAGGCGATCGGCGACAAACTCAATG 1180341 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742 ||||| ||| || | ||||||||| | | ||||| | || ||| || | Sbjct 1180340 TACTGCTGCATGAGGGAGGCGTTCATGCCGAGTAGGGCGCAAGGCAGGGCGTCAGTGAGG 1180281 Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTG--TGCCAGAG 251797 || ||||| ||| | || || || | || | | | | ||| ||| | | Sbjct 1180280 AACTCCTTCTCGATCTTGACGGCGTCAGTGATGATCTCGTGGATGATCTGCTTGCTGGCG 1180221 Query 251798 ACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGT 251857 || || || | |||| ||| || | | || | ||| |||||||||| Sbjct 1180220 -----CGGTGCTTGAGGTGCGAGTGCAGCAGGCAGGCGAAGTCGGTGTGGAGACCCTCGT 1180166 Query 251858 CGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCC 251917 | || |||| ||||||||| | |||||| ||||||| ||||| ||| |||||| Sbjct 1180165 CACGCGAAATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGACCACGCTTCTTGAGCC 1180106 Query 251918 AGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAA 251977 ||||||| | | |||| || ||| | | |||||||| | ||||||| | Sbjct 1180105 AGAAGATGGAGGCGAAGGCGCCGCTGAAGAAGATGCCCTCGACGGCAGCAAATGCAACCA 1180046 Query 251978 GGCGCT 251983 |||||| Sbjct 1180045 GGCGCT 1180040 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027832585869120