Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06-
24] 320 sequences; 30,069,354 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq4 158 2e-33
seq56 109 1e-18
seq25 96.9 7e-15
>seq4
Length=1531359
Score = 158 bits (174), Expect = 2e-33
Identities = 448/679 (66%), Gaps = 17/679 (3%)
Strand=Plus/Plus
Query 279692 GCCAGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCT 279751
||| || || || ||||||||||| |||||||||||||| ||||| |||||||||| ||
Sbjct 465547 GCCCGTCGGCTCCCTGTCGGGTGGATGGAAGATGAAGCTTGCCCTGGCTCGCGCCATGCT 465606
Query 279752 ACTGCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGT 279811
| ||| ||||| ||||| ||||| || ||||| || |||||| ||||| |||||||
Sbjct 465607 GCAGCGCGCCGACGTCCTCCTGCTGGACGAGCCGACTAACCACCTGGACGTGGCCAACGT 465666
Query 279812 AGCCTGGCTAGTGTCCTACCTAACCAGT--CTGAAGAATGTTTCTTCCCTCATTGTCTCT 279869
|||||||| | | |||||| | ||| | | | | | | | | || || ||
Sbjct 465667 GGCCTGGCTGGAGAACTACCT--CAAGTCGCACACGGACATCACCAGCATGATCGTGTCC 465724
Query 279870 CACGACTCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTG 279929
|||||||| |||||||| || ||| | | | |||| ||||| ||| || |
Sbjct 465725 CACGACTCGGGCTTCCTTGACAACGTCACCACCGACATCTACCACTACGAGGCCAACAAG 465784
Query 279930 AAGCTCTCCAAGCACATCGGCAACCTGTCTGCTTTCGTGGCAAAGCGCCCTGAGGCGGCC 279989
||||| || ||| ||||||||||| || || | ||||| |||||
Sbjct 465785 AAGCTGGCCTGCTACAAGGGCAACCTGTCCAAGTTTGTCGAGGTCCGCCCCGAGGCCAAG 465844
Query 279990 GCCTACTATGACCTGAAGGACGCCACCGCCAAGTGGGAATTCCCTGAGCCAGGGTTTCTG 280049
|||||| ||| || ||||| |||| ||| | |||||| || || | |||
Sbjct 465845 AGCTACTACACGCTGTCGGCCGCCAACGCCCAGTTCAAGTTCCCTCCCCCCGGTATCCTG 465904
Query 280050 GAGGGCATCACATCAAAGGATCGCGCAATCAT--GAAGCTCCGTGGCGTCTCCTTTGCTT 280107
|||||||| || || ||||| ||||| | | ||| ||| || | |
Sbjct 465905 ACGGGCATCAAGTCGCAGACCCGCGCCATCATCCGCATGTCCAACGCGACT--TACCAGT 465962
Query 280108 ATCCCAATGGCCCCAA--CATC---TTCAGCAGTGTCAACTCGCAGGTTTCTATGAACTC 280162
| ||||| | |||||| | || || | ||||| | ||| | || ||
Sbjct 465963 ACCCCAAGGCCCCCAAGCCTTCGCTGTCCGACGTGTC--GTGCCAGCTCAGCCTGTCGTC 466020
Query 280163 ACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGAC 280222
|| | | |||| || ||||| ||||| || ||||| ||||| ||||| | || ||
Sbjct 466021 GCGTGTGGCCATCATCGGCCCCAACGGTGCCGGCAAGTCCACCCTCATCAAGATGCTCAC 466080
Query 280223 TGGCGAGACCCAGGCCACTGAGGGGTCCGTTTG-GAAGCATCCCAACATGCGGATGGCTT 280281
|| ||| || || || || | | | |||||| |||||| |||| || | |
Sbjct 466081 GGGTGAG-GTCATCCCCTCGACCGGAAAGGTCGAGAAGCACCCCAACCTGCGTATCGGCT 466139
Query 280282 ACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAAT 280341
|| || |||||||| || | ||| |||||| ||||| || | ||| || ||||| |
Sbjct 466140 ACATCAAGCAGCACGCCCTCGAGCACGTCGAGATGCACCTTGAGAAGACGCCCAACCAGT 466199
Query 280342 ACATTCAGTGGCGCTATGC 280360
|| | ||||||||||| ||
Sbjct 466200 ACCTCCAGTGGCGCTACGC 466218
>seq56
Length=2470257
Score = 109 bits (120), Expect = 1e-18
Identities = 159/222 (72%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
|||||||| ||||| |||| ||||| ||||| || |||| ||||| ||||| |||
Sbjct 501364 GGTGAGGACCTGTGCAACTGCACCTTCTCCCTCGCCTACGGTGCCAAGATCCTGCTCAAC 501305
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|||| |||| ||||||||||| | || || ||||| ||||||||| || |
Sbjct 501304 CAGACCCACCTCCGTCTCAAGCGTGGCCAGCGCTACGGTCTTTGCGGTCCCAACGGTTCC 501245
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|| ||| || || ||||| ||||| |||| ||| | || || || || || |||
Sbjct 501244 GGAAAGTCGACCCTCATGCGTGCCATCAACAACGAGCAGGTTGAGGGCTTCCCCAA-GCA 501186
Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565
|| ||||| | ||| || | || ||||||||| |||||||
Sbjct 501185 GTCCGAGGTCAAGACCGTCTTCGTCGAGCACGACCTCGACTC 501144
Score = 100 bits (110), Expect = 6e-16
Identities = 115/152 (76%), Gaps = 2/152 (1%)
Strand=Plus/Minus
Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731
|| || | ||||| ||| ||||| | ||||||| ||||| |||||||| || || |
Sbjct 499992 CCCAGTTCGGTCTCGACGCCGAGCTCGTCTCTCACTCGCGCATGCGCGGTCTCTCCGGTG 499933
Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790
||||| ||||| |||| ||| || |||| |||||| | || ||| |||||||
Sbjct 499932 GCCAGCGTGTCAAGACTGTCCTCGCCGCTTGCTC-GTGGCAGCGTCCCCACCTGATCGTC 499874
Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGA 280822
|| ||||||||||||||||| |||||||| ||
Sbjct 499873 CTTGACGAGCCTACCAACTACCTGGACCGTGA 499842
Score = 100 bits (110), Expect = 6e-16
Identities = 163/232 (70%), Gaps = 2/232 (1%)
Strand=Plus/Minus
Query 280160 CTCACGGATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCT 280219
||| || |||| |||||||| ||||| ||||| || ||||| ||||| ||||| |||||
Sbjct 500549 CTCCCGTATTGCCGTCATTGGCCCCAACGGTGCCGGCAAGTCGACCCTCATCAACGTCCT 500490
Query 280220 GACTGGCGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGC 280279
|| || ||| | |||| |||| | | |||| ||||| || || ||
Sbjct 500489 CACCGGTGAGCTCATCCCCACCAAGGGTGAGATCTACCAGCACGAGAACATCCGTATTGC 500430
Query 280280 TTACGTCGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCA 280339
||| || |||||||| ||| |||||| || |||||||||||| |||||| |
Sbjct 500429 CTACATCAAGCAGCACGCCTTCGCCCACATTGATAACCACCTGGACTCGACTCCCTCGGA 500370
Query 280340 ATACATTCAGTGGCGCTATGCA-AGTGGGCAGGATCTGGAGTCGGTGGATCG 280390
||||| |||||||| | | || | ||| |||||| ||| || |||| ||
Sbjct 500369 GTACATCCAGTGGCG-TTTCCAGACTGGTGAGGATCGTGAGACGATGGACCG 500319
>seq25
Length=1334681
Score = 96.9 bits (106), Expect = 7e-15
Identities = 278/426 (65%), Gaps = 10/426 (2%)
Strand=Plus/Minus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|| ||||| || | |||||| |||| ||||| ||||||||||||||||||||| |||
Sbjct 1180460 TCAAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTCCATGAAGTCGAAGGGGTTGGTG 1180401
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
|||||||| ||| | ||| || || || | || ||| || || |||||||| |
Sbjct 1180400 GCATTGTAGACCTTCTCGTTGCCGAGGGCGACAAGGAGGCGATCGGCGACAAACTCAATG 1180341
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
||||| ||| || | ||||||||| | | ||||| | || ||| || |
Sbjct 1180340 TACTGCTGCATGAGGGAGGCGTTCATGCCGAGTAGGGCGCAAGGCAGGGCGTCAGTGAGG 1180281
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTG--TGCCAGAG 251797
|| ||||| ||| | || || || | || | | | | ||| ||| | |
Sbjct 1180280 AACTCCTTCTCGATCTTGACGGCGTCAGTGATGATCTCGTGGATGATCTGCTTGCTGGCG 1180221
Query 251798 ACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGT 251857
|| || || | |||| ||| || | | || | ||| ||||||||||
Sbjct 1180220 -----CGGTGCTTGAGGTGCGAGTGCAGCAGGCAGGCGAAGTCGGTGTGGAGACCCTCGT 1180166
Query 251858 CGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCC 251917
| || |||| ||||||||| | |||||| ||||||| ||||| ||| ||||||
Sbjct 1180165 CACGCGAAATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGACCACGCTTCTTGAGCC 1180106
Query 251918 AGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAA 251977
||||||| | | |||| || ||| | | |||||||| | ||||||| |
Sbjct 1180105 AGAAGATGGAGGCGAAGGCGCCGCTGAAGAAGATGCCCTCGACGGCAGCAAATGCAACCA 1180046
Query 251978 GGCGCT 251983
||||||
Sbjct 1180045 GGCGCT 1180040
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027832585869120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |