Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06- 24] 320 sequences; 30,069,354 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq10 129 1e-24 seq64 113 1e-19 seq56 98.7 2e-15 >seq10 Length=2758267 Score = 129 bits (142), Expect = 1e-24 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||||||||| | || ||||| |||| ||| || || ||||| || |||||| Sbjct 926369 CCACCGCGGAGACGGAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 926310 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || || || || || || | || ||||| || |||||||| ||||| || ||| Sbjct 926309 AGAGTACGGCCATCCTCAAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGG 926250 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 || || || || |||||||| || ||| || ||||| || || | || ||| || || Sbjct 926249 ATACCCTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCCGACGACTCGAC 926191 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||||||||| ||||| || ||||| ||||||||||| |||||||| Sbjct 926190 CTCGAGCGTGATAGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 926143 Score = 129 bits (142), Expect = 1e-24 Identities = 169/233 (73%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303 || ||||| || || | || || || || | ||| ||| || ||||| || ||||| Sbjct 926828 TGGCCACCCCGCAGGCGGAGGACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCC 926769 Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363 | || ||||| ||||| || | || || || || ||||| |||||||| || || Sbjct 926768 GACAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGCTGG---TCC 926712 Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420 ||| || || || || ||||| || || | || ||||| || || | ||||||||| Sbjct 926711 GGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCGCTCGAT 926652 Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || || |||||||||||||| || || || ||||||||||| |||||||| Sbjct 926651 TCCACCTCAAGCGTGATCGTCTTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 926599 >seq64 Length=1576225 Score = 113 bits (124), Expect = 1e-19 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| || || | || || || || | ||| || || ||||| || |||||| Sbjct 136475 CCACCACGCAGGCGCAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTC 136534 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || | || || || ||||||||||| ||||| || ||| Sbjct 136535 AGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGG 136594 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || |||||||| || | || ||||| || || | ||| || || || Sbjct 136595 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 136654 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| |||||||| || || ||||||||||| |||||||| Sbjct 136655 TCGAGGGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 136701 >seq56 Length=2470257 Score = 98.7 bits (108), Expect = 2e-15 Identities = 155/221 (70%), Gaps = 6/221 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || || || || | || || || ||||| || ||||||| Sbjct 880796 CCACCACGGAGGCGGAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 880737 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || ||||| ||||||||||| ||||| || || ||| Sbjct 880736 AGGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTG---GTCCGGG 880680 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || || || || |||||||| || | || || || || || | || || || Sbjct 880679 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCG 880620 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464 || ||||| ||||| ||||| || ||||| ||||| ||||| Sbjct 880619 ACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 880579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179649563416960