Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06-
24] 320 sequences; 30,069,354 total letters
Query= NC_009898.1
Length=368683
Score E
Sequences producing significant alignments: (Bits) Value
seq10 129 1e-24
seq64 113 1e-19
seq56 98.7 2e-15
>seq10
Length=2758267
Score = 129 bits (142), Expect = 1e-24
Identities = 167/228 (73%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||||||||| | || ||||| |||| ||| || || ||||| || ||||||
Sbjct 926369 CCACCGCGGAGACGGAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 926310
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| || || || || || | || ||||| || |||||||| ||||| || |||
Sbjct 926309 AGAGTACGGCCATCCTCAAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGG 926250
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCT-TTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425
|| || || || |||||||| || ||| || ||||| || || | || ||| || ||
Sbjct 926249 ATACCCTCCTTGTCCTGGATCTT-GCTCTTGACGTTGTCGATGGTGTCCGACGACTCGAC 926191
Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||||||||| ||||| || ||||| ||||||||||| ||||||||
Sbjct 926190 CTCGAGCGTGATAGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 926143
Score = 129 bits (142), Expect = 1e-24
Identities = 169/233 (73%), Gaps = 6/233 (3%)
Strand=Plus/Minus
Query 288244 TGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCG 288303
|| ||||| || || | || || || || | ||| ||| || ||||| || |||||
Sbjct 926828 TGGCCACCCCGCAGGCGGAGGACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCC 926769
Query 288304 GCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCT 288363
| || ||||| ||||| || | || || || || ||||| |||||||| || ||
Sbjct 926768 GACAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAGATAAGACGCTGCTGG---TCC 926712
Query 288364 GGG---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGAT 288420
||| || || || || ||||| || || | || ||||| || || | |||||||||
Sbjct 926711 GGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATGGTGTCGCTCGAT 926652
Query 288421 TCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
|| || || |||||||||||||| || || || ||||||||||| ||||||||
Sbjct 926651 TCCACCTCAAGCGTGATCGTCTTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 926599
>seq64
Length=1576225
Score = 113 bits (124), Expect = 1e-19
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| || || | || || || || | ||| || || ||||| || ||||||
Sbjct 136475 CCACCACGCAGGCGCAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTC 136534
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| || || || | || || || ||||||||||| ||||| || |||
Sbjct 136535 AGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGG 136594
Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426
|| || || || |||||||| || | || ||||| || || | ||| || || ||
Sbjct 136595 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 136654
Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473
||||| ||||| |||||||| || || ||||||||||| ||||||||
Sbjct 136655 TCGAGGGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCAT 136701
>seq56
Length=2470257
Score = 98.7 bits (108), Expect = 2e-15
Identities = 155/221 (70%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306
||||| ||||| | || || || || | || || || ||||| || |||||||
Sbjct 880796 CCACCACGGAGGCGGAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 880737
Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366
|| ||||| ||||| || | || ||||| ||||||||||| ||||| || || |||
Sbjct 880736 AGGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTG---GTCCGGG 880680
Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423
|| || || || |||||||| || | || || || || || | || || ||
Sbjct 880679 GGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCG 880620
Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAA 288464
|| ||||| ||||| ||||| || ||||| ||||| |||||
Sbjct 880619 ACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAA 880579
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1179649563416960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |