Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06-
24] 320 sequences; 30,069,354 total letters
Query= NC_010240.1
Length=169794
Score E
Sequences producing significant alignments: (Bits) Value
seq10 131 2e-25
seq64 113 5e-20
seq56 96.9 4e-15
>seq10
Length=2758267
Score = 131 bits (144), Expect = 2e-25
Identities = 148/193 (77%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077
||||| || || ||||| || | ||| || || |||| || |||||||||||||| ||
Sbjct 926789 TCCTTCTGGATGTTGTAGTCCGACAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAG 926730
Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGT 42136
|| || ||||||||||| | || | || |||||||||| ||| | || | |||| |||
Sbjct 926729 ATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCC-TGAATCTTGGACTTGA-CGT 926672
Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195
| | | ||||||||||||||||| || | |||||| || ||||| || |||||||| |
Sbjct 926671 TGTCAATGGTGTCGCTCGATTCCACCTCAAGCGTGATCGTCTTGCCAGTGAGCGTCTTGA 926612
Query 42196 CAAAGATTTGCAT 42208
| || || |||||
Sbjct 926611 CGAAAATCTGCAT 926599
Score = 102 bits (112), Expect = 9e-17
Identities = 140/193 (73%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| ||||| ||||| ||| |||||| || | || || |||||||| || |||||
Sbjct 926562 CTCCTTCTGAATGTTGTAGTCACTCAGAGTACGGCCATCCTCGAGCTGCTTTCCGGCGAA 926503
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 42135
|| || ||||||||||| | || | | |||||||||| ||| | || | ||||
Sbjct 926502 AATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCC-TGAATCTTCGACTTGACAT 926444
Query 42136 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195
| | | || || || ||||| |||| |||||||| || || || || ||||| |
Sbjct 926443 TGTCGATAGTATCCGAAGACTCCACCTCGAGGGTGATGGTCTTTCCGGTCAGGGTCTTGA 926384
Query 42196 CAAAGATTTGCAT 42208
||||||| |||||
Sbjct 926383 CAAAGATCTGCAT 926371
Score = 100 bits (110), Expect = 3e-16
Identities = 128/174 (74%), Gaps = 2/174 (1%)
Strand=Plus/Minus
Query 42012 GTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCA 42071
||||||||||| || || ||||| || | || || || |||| || |||||||| |||
Sbjct 926111 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCA 926052
Query 42072 GCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTG 42131
||||| ||||| ||||||||||| | || | || |||||||||| ||| || |||
Sbjct 926051 GCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 925992
Query 42132 AGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 42184
| ||| | | | |||||| || || || || | |||||||| ||||| ||
Sbjct 925991 A-CGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTGCCAGT 925939
Score = 98.7 bits (108), Expect = 1e-15
Identities = 139/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||| || |||||| || | || || |||||||| || || ||
Sbjct 926334 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCAAGCTGCTTTCCGGCAAA 926275
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| || ||||||||||| | || | | |||||||||| ||| || |||| |||
Sbjct 926274 GATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGCTCTTGA-CGT 926216
Query 42137 CG-CCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 42195
| | | ||||| ||| || || |||| |||||| || || ||||| || ||||| |
Sbjct 926215 TGTCGATGGTGTCCGACGACTCGACCTCGAGCGTGATAGTCTTACCCGTCAGGGTCTTGA 926156
Query 42196 CAAAGATTTGCAT 42208
| ||||| |||||
Sbjct 926155 CGAAGATCTGCAT 926143
>seq64
Length=1576225
Score = 113 bits (124), Expect = 5e-20
Identities = 158/219 (72%), Gaps = 2/219 (1%)
Strand=Plus/Plus
Query 41994 CGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCG 42053
|||| ||||| || | ||| |||||| || || ||||| || |||||| || |
Sbjct 136487 CGCAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCA 136546
Query 42054 TCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTG 42113
|| || |||||||| |||||||| || || ||||||||||| | || | | |||||||
Sbjct 136547 TCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTG 136606
Query 42114 TCCATGATTTTTTGTTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCGACCGTGAT 42172
||| ||| || |||| ||| | | | |||||| || ||||| |||| |||||
Sbjct 136607 TCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGAT 136665
Query 42173 GGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211
|| || ||||| || ||||| || ||||| ||||| ||
Sbjct 136666 AGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTT 136704
>seq56
Length=2470257
Score = 96.9 bits (106), Expect = 4e-15
Identities = 131/183 (72%), Gaps = 0/183 (0%)
Strand=Plus/Minus
Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076
|||||| || || ||||| || | ||| || || |||| || |||||||| || |||||
Sbjct 880761 CTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAA 880702
Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136
|| || ||||||||||| | || | || |||||||||| ||| || |||| |
Sbjct 880701 GATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATT 880642
Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196
| | ||||| || || || |||| |||||||| |||||||| || ||||| ||
Sbjct 880641 GTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCAC 880582
Query 42197 AAA 42199
||
Sbjct 880581 GAA 880579
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543210627148800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |