Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06-
24] 320 sequences; 30,069,354 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq64 86.0 6e-12
seq10 86.0 6e-12
>seq64
Length=1576225
Score = 86.0 bits (94), Expect = 6e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 45114 CCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTG 45173
|| || || || | || ||| || || || || || ||||| ||||| || || |||||
Sbjct 136475 CCACCACGCAGGCGCAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTC 136534
Query 45174 ACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGA 45233
| || ||| || | || || || ||| | |||| || ||||||||||| ||
Sbjct 136535 AGAGTGCGGCCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGG 136594
Query 45234 ATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGAC 45292
|| || || || || || || || |||| || | || | ||||||||||||||| ||
Sbjct 136595 ATACCCTCCTTGTCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCAC 136653
Query 45293 TTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
||||| || | || || || || || || || || || || ||||||
Sbjct 136654 CTCGAGGGTGATAGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATC 136702
>seq10
Length=2758267
Score = 86.0 bits (94), Expect = 6e-12
Identities = 159/231 (69%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || |||||||| | | || || || ||||| || ||||| ||||| || || |||
Sbjct 926372 ATACCACCGCGGAGACGGAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCG 926313
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| | || ||| || | || ||||| || | |||| || |||||||||||
Sbjct 926312 CTCAGAGTACGGCCATCCTCAAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGGTCCGGG 926253
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
|| || || || || || || || || |||| || | || | |||||| || |||||
Sbjct 926252 GGGATACCCTCCTTGTCCTGGATCTTGCTCTTGA-CGTTGTCGATGGTGTCCGACGACTC 926194
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||| ||||| || | || || || || || || || || || || |||||
Sbjct 926193 GACCTCGAGCGTGATAGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 926143
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 452001391987200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |