Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06-
24] 320 sequences; 30,069,354 total letters
Query= NC_013772.1
Length=176677
Score E
Sequences producing significant alignments: (Bits) Value
seq10 136 4e-27
seq64 134 2e-26
seq56 131 2e-25
>seq10
Length=2758267
Score = 136 bits (150), Expect = 4e-27
Identities = 147/192 (77%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 46403 TCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 46462
||||| ||||| |||||||| || || ||||| |||| ||||||||||| || || ||
Sbjct 926789 TCCTTCTGGATGTTGTAGTCCGACAGGGTGCGACCGTCCTCGAGCTGCTTACCAGCAAAG 926730
Query 46463 ATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTC 46522
|| | ||||||||||| | || | || |||||||||| ||||| ||||| |||
Sbjct 926729 ATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGAATCTTGGACTTGA-CGTT 926671
Query 46523 GCCACCG-TGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581
| || | |||||||||||||||| || | |||||| || ||||| || ||||| || ||
Sbjct 926670 GTCAATGGTGTCGCTCGATTCCACCTCAAGCGTGATCGTCTTGCCAGTGAGCGTCTTGAC 926611
Query 46582 AAAGATTTGCAT 46593
|| || |||||
Sbjct 926610 GAAAATCTGCAT 926599
Score = 125 bits (138), Expect = 8e-24
Identities = 145/193 (75%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461
|||||| ||||| ||||||||| ||||| || | || || |||||||| ||||| ||
Sbjct 926334 CTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCAAGCTGCTTTCCGGCAAA 926275
Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521
|||| |||||||||||| | || | | |||||||||| |||||| |||||| |||
Sbjct 926274 GATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGGATCTTGCTCTTGA-CGT 926216
Query 46522 CG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAA 46580
| | | ||||| ||| || || || | |||||| || || |||||||| || || |
Sbjct 926215 TGTCGATGGTGTCCGACGACTCGACCTCGAGCGTGATAGTCTTACCCGTCAGGGTCTTGA 926156
Query 46581 CAAAGATTTGCAT 46593
| ||||| |||||
Sbjct 926155 CGAAGATCTGCAT 926143
Score = 118 bits (130), Expect = 1e-21
Identities = 132/174 (76%), Gaps = 2/174 (1%)
Strand=Plus/Minus
Query 46397 GTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCG 46456
|| |||||||| ||||| ||||||||||| || ||||| |||| || |||||||||||
Sbjct 926111 GTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGGCCGTCCTCAAGCTGCTTGCCA 926052
Query 46457 GCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTG 46516
||||| || | ||||||||||| | || | || |||||||||| |||||| ||||
Sbjct 926051 GCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGGATCTTGGACTTG 925992
Query 46517 AGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGT 46569
| ||| | | | |||||| || || || || | |||||||| ||||| ||
Sbjct 925991 A-CGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTGCCAGT 925939
Score = 116 bits (128), Expect = 4e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
||||| |||| || |||||| || || |||||||| ||||| || | || |||
Sbjct 926579 ACCAGGTGCAGAGTCGACTCCTTCTGAATGTTGTAGTCACTCAGAGTACGGCCATCCTCG 926520
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|||||||| |||||||| |||| |||||||||||| | || | | ||||||||||
Sbjct 926519 AGCTGCTTTCCGGCGAAAATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGA 926460
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
|||||| ||||| | | | || || || ||||| || | |||||||| ||
Sbjct 926459 ATCTTCGACTTGACATTGTCGATAGTATCCGAAGACTCCACCTCGAGGGTGATGGTCTTT 926400
Query 46565 CCCGTCAGCGTTTTAACAAAGATTTGCAT 46593
|| ||||| || || |||||||| |||||
Sbjct 926399 CCGGTCAGGGTCTTGACAAAGATCTGCAT 926371
>seq64
Length=1576225
Score = 134 bits (148), Expect = 2e-26
Identities = 164/221 (74%), Gaps = 2/221 (1%)
Strand=Plus/Plus
Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438
|||| |||||| || | || |||||| ||||| ||||||||| |||||||| |
Sbjct 136487 CGCAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCA 136546
Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTG 46498
|| || ||||||||||| ||||| |||| |||||||||||| | || | | |||||||
Sbjct 136547 TCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTG 136606
Query 46499 TCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGAT 46557
||| |||||| ||||| ||| | | | |||||| || ||||| || | |||||
Sbjct 136607 TCCTGGATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGAT 136665
Query 46558 GGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGC 46598
|| || ||||| || || || || ||||| ||||| ||||
Sbjct 136666 AGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTTGC 136706
>seq56
Length=2470257
Score = 131 bits (144), Expect = 2e-25
Identities = 149/200 (75%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 46385 ACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCG 46444
||||| |||| || |||||| ||||| ||||||||||| || ||||| |||| ||
Sbjct 880778 ACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCA 880719
Query 46445 AGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATG 46504
|||||||| |||||||| |||| |||||||||||| | || | || |||||||||| |
Sbjct 880718 AGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 880659
Query 46505 ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTG 46564
||||| ||||| | | | ||||| || || || || | |||||||| |||
Sbjct 880658 ATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTG 880599
Query 46565 CCCGTCAGCGTTTTAACAAA 46584
|||||||| || || || ||
Sbjct 880598 CCCGTCAGGGTCTTCACGAA 880579
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 565236139046400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |