Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06-
24] 320 sequences; 30,069,354 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq25 172 5e-38
seq64 132 5e-26
seq56 132 5e-26
seq10 120 3e-22
>seq25
Length=1334681
Score = 172 bits (190), Expect = 5e-38
Identities = 204/276 (74%), Gaps = 3/276 (1%)
Strand=Plus/Minus
Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226
||||| ||| ||||| || ||| | |||||||| | ||||||||| ||| || ||
Sbjct 1179862 GTAGGAGTCAATGAGCAGAGAGTACGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAA 1179803
Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286
|||||| ||||| || |||||| | ||| || || ||||||||||||||| ||
Sbjct 1179802 GCCGTAGAAGCAGCGAGCCTCGGGGATCTGGACCTCGCCGCTGAAACGCTCGACCAGGTT 1179743
Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346
|||||||| |||||||| ||||||||| ||||| || | ||| ||||||
Sbjct 1179742 CTCGTTGACAATGCCGTCAGAGGCGGCGAAGAAGGCAAGGATGTGAGAGATGAAGAACTT 1179683
Query 133347 CTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403
||||| ||||| | ||| | ||||||| | ||||||||||||||| | ||||||
Sbjct 1179682 CTCGTCATCGTTGATGCGGTTGTTCCAGTCGTGGAGGTCCTTGGACAGGTCAATCTCCTC 1179623
Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439
| | ||||| || || |||||||| || ||||||||
Sbjct 1179622 GGCAGTCCAGAAAGAAGCCTCGGCCTTCTTGTACAT 1179587
Score = 161 bits (178), Expect = 1e-34
Identities = 341/503 (68%), Gaps = 12/503 (2%)
Strand=Plus/Minus
Query 132604 TTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGC 132663
|| || || ||||| || |||||||| || || || || || ||| ||| ||| |
Sbjct 1180484 TTCTGGTACTCGCCGACGCGCTTCTCAAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTC 1180425
Query 132664 GTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTT---GGTGCCGATCAGGTCGACG 132720
||| || || |||||||||| | |||||| ||| | |||||| || ||||
Sbjct 1180424 TCCATGAAGTCGAAGGGGTTGGTGGCATTGTAGACCTTCTCGTTGCCGA---GGGCGACA 1180368
Query 132721 AGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATTAAGTCCCAGC 132780
|| || | ||||| || ||||| ||||| ||| |||| | || | || ||
Sbjct 1180367 AGGAGGCGATCGGCGACAAACTCAATGTACTGCTGCATGAGGGAGGCGTTCATGCCGAGT 1180308
Query 132781 AGA-CGCACCGGCAGCGCTTCGGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGAC 132839
|| |||| ||||| || || ||||| || | |||||| ||| ||||| ||||
Sbjct 1180307 AGGGCGCAA-GGCAGGGCGTCAGTGAGGAACTCCTTCTCGATCTTGACGGCGTCAGTGAT 1180249
Query 132840 GATTTCCCTAACGCGCGCCGCGCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGC 132899
||| || | | | | ||| | || ||| | ||| | || || ||| ||
Sbjct 1180248 GATCTCGTGGATGATCTGCTTGCTGGCGCGGTGCTTGAGGTGCGAGTGCAGCAGGCAGGC 1180189
Query 132900 AAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGG 132959
|||||| || | |||||||| | |||||||| |||||| ||| |||| ||||||
Sbjct 1180188 GAAGTCGGTGTGGAGACCCTCGTCACGCGAAATGAGCTCGTTGGAGAAGGTCAGGCCGGG 1180129
Query 132960 CATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCC 133019
||| || || || || |||||||| || |||| |||||| ||| ||||||| |||
Sbjct 1180128 CATCAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCGCCGCTGAAGAAGATGCC 1180069
Query 133020 CTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTT--CTTTGCTGGCGATC 133077
||||||||| || || || |||||||||| | |||| |||| | | | ||| ||||
Sbjct 1180068 CTCGACGGCAGCAAATGCAACCAGGCGCTGGGCGAAGGTGGAGTCACGGTCCTG--GATC 1180011
Query 133078 CAGCGCAGCGCCCATTCGGCCTT 133100
|| | | ||||| ||||||||
Sbjct 1180010 CACCTGATGGCCCAGTCGGCCTT 1179988
>seq64
Length=1576225
Score = 132 bits (146), Expect = 5e-26
Identities = 172/235 (73%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300
|| ||||| || ||||| || || |||||||| || || |||||| |||| || ||| |
Sbjct 136704 AAGATGCAGATCTTCGTCAAGACCCTCACGGGGAAGACTATCACCCTCGAGGTGGAGTCT 136645
Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359
|||||| | | | |||| | || || |||| ||||| ||||| || ||| | ||
Sbjct 136644 TCCGACACCATCGACAACG-TCAAGTCCAAGATCCAGGACAAGGAGGGTATCCCCCCGGA 136586
Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419
||| ||||| || || | ||| ||||| ||||| || || | ||||| || | ||||||
Sbjct 136585 CCAGCAGCGCCTGATCTTCGCTGGCAAGCAGCTTGAGGATGGCCGCACTCTGAGCGACTA 136526
Query 38420 CAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCCGC 38474
||||||||| ||||| | || || || |||||||||| || | || ||| ||
Sbjct 136525 CAACATCCAGAAGGAGTCCACTCTCCACCTGGTGCTGCGCCTGCGTGGTGGCGGC 136471
>seq56
Length=2470257
Score = 132 bits (146), Expect = 5e-26
Identities = 153/206 (74%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 38253 TTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTG 38312
||||| || || || |||||||| ||||||||| |||| |||||| || | |||| | |
Sbjct 880579 TTCGTGAAGACCCTGACGGGCAAGACCATCACCCTCGAGGTCGAGTCCTCGGACACCATC 880638
Query 38313 CAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTC 38372
| | | || || |||| ||||| ||||| |||||| | ||||| ||||| ||
Sbjct 880639 GACAATGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAGCAGCGCCTG 880698
Query 38373 ATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAG 38432
|| | ||| || || ||||| || |||| |||||||| ||||||||||||||| |||
Sbjct 880699 ATCTTCGCCGGAAAGCAGCTTGAGGACGGCCGCACCCTGTCCGACTACAACATCCAGAAG 880758
Query 38433 GAAGCGACGCTGCATTTGGTGCTGCG 38458
|| |||| ||||| |||| || ||
Sbjct 880759 GAGTCGACCCTGCACCTGGTCCTCCG 880784
>seq10
Length=2758267
Score = 120 bits (132), Expect = 3e-22
Identities = 130/170 (76%), Gaps = 2/170 (1%)
Strand=Plus/Plus
Query 38266 TCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAA 38324
|||| ||||| |||||||| | || |||||| || |||||| | | | |||| | ||
Sbjct 925937 TCACTGGCAAGACCATCACTCTTGAGGTCGAGTCCTCCGACACCATCGACAACG-TCAAG 925995
Query 38325 GAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGC 38384
|| |||| ||||| ||||| ||||| | ||||| ||||| ||||||| ||| |||
Sbjct 925996 TCCAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTCTCATTTTCGCTGGC 926055
Query 38385 AAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGA 38434
|| ||||| || |||| ||||| ||| ||||||||||||||| |||||
Sbjct 926056 AAGCAGCTTGAGGACGGCCGCACGCTCTCCGACTACAACATCCAGAAGGA 926105
Score = 111 bits (122), Expect = 2e-19
Identities = 164/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || |||||||| ||||| || ||||| | || || || | | |
Sbjct 926599 ATGCAGATTTTCGTCAAGACGCTCACTGGCAAGACGATCACGCTTGAGGTGGAATCGAGC 926658
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || || || | ||||| ||||| |||||| | |||||
Sbjct 926659 GACACCATTGACAACG-TCAAGTCCAAGATTCAGGACAAGGAGGGCATTCCCCCGGACCA 926717
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||||| || || | || || || ||||| || |||| |||||||| ||||||||
Sbjct 926718 GCAGCGTCTTATCTTTGCTGGTAAGCAGCTCGAGGACGGTCGCACCCTGTCGGACTACAA 926777
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
|||||| |||||| | || || || |||| || || || | || ||||
Sbjct 926778 CATCCAGAAGGAATCCACCCTCCACCTGGTCCTCCGCCTGCGGGGTGGCC 926827
Score = 109 bits (120), Expect = 5e-19
Identities = 157/218 (72%), Gaps = 4/218 (2%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || || ||||| || || ||||| |||| |||||| | |
Sbjct 926143 ATGCAGATCTTCGTCAAGACCCTGACGGGTAAGACTATCACGCTCGAGGTCGAGTCGTCG 926202
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||| | | | |||| | |||| || |||| ||||| ||||| || ||| | ||||
Sbjct 926203 GACACCATCGACAACG--TCAAGAGCAAGATCCAGGACAAGGAGGGTATCCCCCCGGACC 926260
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| ||||| || || | || || || ||||| || || | || || || | ||||||||
Sbjct 926261 AGCAGCGCCTGATCTTTGCCGGAAAGCAGCTTGAGGATGGCCGTACTCTGAGCGACTACA 926320
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459
||||||| ||||| ||||||| || | || || |||
Sbjct 926321 ACATCCAGAAGGAGTCGACGCTTCACCTCGTCCTCCGT 926358
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500170799308800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |