Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06-
24] 320 sequences; 30,069,354 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq10 140 7e-28
seq64 134 3e-26
seq56 122 2e-22
>seq10
Length=2758267
Score = 140 bits (154), Expect = 7e-28
Identities = 159/212 (75%), Gaps = 6/212 (3%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || ||||| || || || || ||||| || | || || | || || |||
Sbjct 926807 ACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGACCGTCCTCG 926748
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||||||||| || |||||||| || || ||||| || |||||||| || ||||| |||
Sbjct 926747 AGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGA 926688
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTC 195108
|| || ||||||||| ||||||||||| ||| |||||| ||||| || | ||||
Sbjct 926687 ATCTTGGACTTGACGTTGTCAATGGTGTCGCTCGA---TTCCACCTCAAGCGTGATCGTC 926631
Query 195109 TTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || || | || || ||||| | |||||
Sbjct 926630 TTGCCAGTGAGCGTCTTGACGAAAATCTGCAT 926599
Score = 136 bits (150), Expect = 9e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| ||||| ||||| ||||| || ||||| ||||| || ||||| | ||||| ||
Sbjct 926580 AACCAGGTGCAGAGTCGACTCCTTCTGAATGTTGTAGTCACTCAGAGTACGGCCATCCTC 926521
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
||||||||| || ||||| || || || || ||||| ||||| || || || ||||| ||
Sbjct 926520 GAGCTGCTTTCCGGCGAAAATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTG 926461
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
||| || |||||| || || || || |||||| ||||| || ||||| | |||||
Sbjct 926460 AATCTTCGACTTGACATTGTCGATAGTATCCGAAGACTCCACCTCGAGGGTGATGGTCTT 926401
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| |||| || || || || | |||||
Sbjct 926400 TCCGGTCAGGGTCTTGACAAAGATCTGCAT 926371
Score = 120 bits (132), Expect = 7e-22
Identities = 152/209 (73%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| |||||||| || ||||| || || || ||||| ||| ||||| | ||||| ||
Sbjct 926351 ACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTACGGCCATCCTCA 926292
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || || ||||| || || || ||||| || || || || || ||||| ||
Sbjct 926291 AGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 926232
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||| || ||||||||||| || || || || || | |||||
Sbjct 926231 ATCTTGCTCTTGACGTTGTCGATGGTGTCCGACGACTCGACCTCGAGCGTGATAGTCTTA 926172
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| |||| || || ||||| | |||||
Sbjct 926171 CCCGTCAGGGTCTTGACGAAGATCTGCAT 926143
Score = 113 bits (124), Expect = 1e-19
Identities = 136/185 (74%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| |||||| ||| || || || ||||| |||| || || | || || ||
Sbjct 926123 ACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGGCCGTCCTCA 926064
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || ||||| || || || || ||||| ||||||||||| || ||||| ||
Sbjct 926063 AGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGG 926004
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||| || |||||||| || || || ||||| || | |||||
Sbjct 926003 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACCTCAAGAGTGATGGTCTTG 925944
Query 195112 CCTGT 195116
|| ||
Sbjct 925943 CCAGT 925939
>seq64
Length=1576225
Score = 134 bits (148), Expect = 3e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| ||||||||||| || || || ||||| ||| ||||| | ||||| ||
Sbjct 136493 ACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGGCCATCCTCA 136552
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| || || || ||||| || || || || || ||||| ||
Sbjct 136553 AGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCCTTGTCCTGG 136612
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||||||| || |||||||| ||| ||||| || ||||| | |||||
Sbjct 136613 ATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTGATAGTCTTC 136672
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | || || ||||| | |||||
Sbjct 136673 CCCGTGAGGGTCTTGACGAAGATCTGCAT 136701
>seq56
Length=2470257
Score = 122 bits (134), Expect = 2e-22
Identities = 147/200 (74%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| ||||| || || ||||| || || || ||||| |||| || || | || || ||
Sbjct 880778 ACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAGGGTGCGGCCGTCCTCA 880719
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| || || || ||||| || |||||||| || ||||| ||
Sbjct 880718 AGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGG 880659
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || |||||| || || ||||||||||| || || || ||||| | |||||
Sbjct 880658 ATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCGACCTCGAGGGTGATGGTCTTG 880599
Query 195112 CCTGTCAAAGTTTTTACGAA 195131
|| |||| || || |||||
Sbjct 880598 CCCGTCAGGGTCTTCACGAA 880579
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109477051125440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |