Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06- 24] 320 sequences; 30,069,354 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq10 324 3e-83 seq25 190 4e-43 >seq10 Length=2758267 Score = 324 bits (358), Expect = 3e-83 Identities = 853/1281 (67%), Gaps = 41/1281 (3%) Strand=Plus/Plus Query 221411 GACTGCGTCAGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCC 221470 |||| ||||| ||| |||||||||||||||||||||||| | ||| || |||| Sbjct 2184129 GACTCCGTCACGGCGGCGTGGTAGATGGTCTCAAAGATCTGCAGGTTCAGCTGGCGGGCC 2184188 Query 221471 TCGGGAGAAGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCG 221530 ||||| || || ||||| ||||| | | ||| |||||||||| ||||| | || Sbjct 2184189 TCGGGCGACTCAAACGGCATGCGCAGAGCCAGGAAGGCGTCGGCCAGACCCTGGATACCC 2184248 Query 221531 ATACCGATGGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGT 221588 | || ||||| | ||| | | ||||| | |||| || || ||||| || ||| Sbjct 2184249 AGGCCAATGGGGCGGTGGCGCATGTTGCTGTTGCGG--GCCTCGATGACGGGGTAGTAGT 2184306 Query 221589 TGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCT 221648 |||| ||||| | ||||||||||| | || ||| ||||||| |||| || Sbjct 2184307 TGACATCGATGATCTTGTTGAGGTTGCGGACGACGACACGCGTCACCTCGTGCAGC--CT 2184364 Query 221649 GGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAA 221708 | ||||| | | ||||| | ||| || || ||||| | ||||| | Sbjct 2184365 G----TTGAAGTCGTAGACGCCGTTG--GTGTAG----TCGACAAACGACGGCAGGGCCA 2184414 Query 221709 CGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTAC 221768 ||||||||| || |||||||||||||| | | |||| | ||||| || | Sbjct 2184415 GCGAGGCCAGGTTGCAGACGGCCACCTCGTCGGGGGCAGAGTACTCGACAATCTCGGTGC 2184474 Query 221769 AGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG- 221827 | |||||| || |||||| ||||||| || || || |||||| ||| ||| | Sbjct 2184475 ACAGGTTGGAGCTGCGGATGGTGCCCAGGTTCTTCTGGTTGCTCTTGCGGTTG-CAGTGG 2184533 Query 221828 TCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAG 221887 |||||||||||||| ||||| || ||||| ||| ||| | || ||| || ||| Sbjct 2184534 TCCTTGTAGAGCATGAAGGGGTTACCCGTCTCGGTCTGGGCCTCGAGGATCGAGTACCAC 2184593 Query 221888 AGTTCTCTGG-CGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATA 221946 || | ||||| ||| | |||| | | | ||||| ||| | | | || || | Sbjct 2184594 AGCT-TCTGGGCGCGGATCGTCTTGCGGCCGCGGCCCTCCCTCTCGTACTTCTCG-TACA 2184651 Query 221947 GAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACAT 222006 |||| | |||||| || |||| | ||| ||||||| || ||| | ||| ||||| Sbjct 2184652 GAGCCT--CAAACTCGTCGCCGTGGACGTCGGCCAGGCCGGGGCACTCGTTGGGGCACAT 2184709 Query 222007 CAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGC 222066 || |||||| ||| | | ||| | || |||||||||||| || ||||| || || Sbjct 2184710 GAGGGTCCAGTCGCCGTTCTTCTCGACACGCTTCATGAAGAGGTCGGGAATCCAGAGGGC 2184769 Query 222067 CTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAA 222126 | || || || | || || ||||||| |||| ||| || | || || | || Sbjct 2184770 GAGGAACAGGTCGCGGGCGCGGACCTCCTCCTTACCGTGGTTCTTGCGGAGGTCGAGGAA 2184829 Query 222127 CTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGA--GCGCCGGGTCGCTTG 222184 |||||| | || |||||||| ||||| || |||| | |||| || ||||| |||||| Sbjct 2184830 CTCAAAGACATCGGCGTGCCAGGGCTCGAGGTAGATG--CAGAAGGCACCGGGGCGCTTG 2184887 Query 222185 TTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGGTACCAGT 222244 ||||||||||| || || | || |||| ||| || || | || | | Sbjct 2184888 TTGCCACCCTGGTCGACGTAGCGGGCCGTGTTGTTGTAGACACGCAGCATGGGGATGATG 2184947 Query 222245 CCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTACTGGCA 222304 |||||||| ||||||||| || |||||| | || ||| | || | | || Sbjct 2184948 CCGTTGGAGGTACCGTTGGTACCGGCAATGTAGGAGCCCGTGGCAC---GGATGC-GGTG 2185003 Query 222305 GAC----ATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTC 222360 ||| | ||| || |||||||| || ||||||||||| || ||||||| ||||| Sbjct 2185004 GACGTTGAGGCCAATGCCACCGGCCGTCTTGGAGATCATGGCACACGTCTTGAGGGTGTC 2185063 Query 222361 CATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGA 222420 |||||| || || ||| ||||||| || | || || || ||||||| ||| | Sbjct 2185064 GTAGATGCCATCGATGCTGTCGTCCTTGATGTCGACGAGGAAGCACGACGACAGCTGGGC 2185123 Query 222421 TTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACAT 222480 | || || || |||||| || || ||||| |||||| || ||||| | ||||| Sbjct 2185124 CTGGGGGGTACCGGCGTTGAAGAGGGTGGGGGAGGCGTGGGTGAAGTACTTGTTGGACAT 2185183 Query 222481 CAGATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGCATGGCGCATC 222539 || | ||||||||| | ||| | | | |||||| ||| || | | | |||| | Sbjct 2185184 GAGGTTGTACGTCTCAATGACACGCTCAACGTTGTCACCCCAGATGCCG-ACGGCGACAC 2185242 Query 222540 TCATGTACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAGGTACGA 222597 ||| ||||| |||||| | ||| ||| || | ||||| ||||||||| || Sbjct 2185243 GCATAATCATGTGCTGGGGGCGCTCGACAATCTTGCCGTTGAGCT--TGAGCAGGTAGGA 2185300 Query 222598 TTTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGC 222657 || || |||||||| |||||||| | | || ||||| | | | | || | ||| Sbjct 2185301 GCGCTCGAGGGTCTTGAAGCCAAAGTACTGGTAGTTGAAGTCACGGTCATAGACAATGGC 2185360 Query 222658 GGCGTCCAGCTCCGACTTGTG 222678 | ||| | |||| |||||| Sbjct 2185361 CGAGTCAAACTCCTCCTTGTG 2185381 Score = 105 bits (116), Expect = 1e-17 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175 ||| ||||| ||||| || || | || || | | | ||| | ||| || ||| | || Sbjct 2183843 GTTGACCACCTGGAACTCGCCAGCCAGGACACGGCGCGAGTAGATGTTGGACGTGTAGGG 2183902 Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235 |||| || ||||||||||||||||||||| | ||||||||| ||||||||||| ||||| Sbjct 2183903 CTCGAAGCACTCGTTGTTGCCCAGGATCTGCGACGTGCTGGCCGTGGGCATGGGCGCCAC 2183962 Query 221236 CAGCAGACTGTTGCGC 221251 ||||| ||||||| Sbjct 2183963 GAGCAGCGAGTTGCGC 2183978 >seq25 Length=1334681 Score = 190 bits (210), Expect = 4e-43 Identities = 350/515 (68%), Gaps = 9/515 (2%) Strand=Plus/Plus Query 25810 CCCAGCATCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACG 25869 ||| ||||| | |||||| |||||||| | ||||||| | || | | || Sbjct 1179973 CCCTGCATCCGTAAGAAGGCCGACTGGGCCATCAGGTGGATCCAGGACCGTGACTCCACC 1180032 Query 25870 TTTGGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTT 25929 || | | |||| ||||| || |||||||| || ||||||||||| |||||||| | || Sbjct 1180033 TTCGCCCAGCGCCTGGTTGCATTTGCTGCCGTCGAGGGCATCTTCTTCAGCGGCGCCTTC 1180092 Query 25930 GCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAG 25989 || ||||||||||||||||| || || |||||||| ||| ||| ||||||||| Sbjct 1180093 GCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGCCTGACCTTCTCCAACGAG 1180152 Query 25990 CTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCAC 26049 ||||| | |||||||||||||||| || || ||||||||||| || || || | Sbjct 1180153 CTCATTTCGCGTGACGAGGGTCTCCACACCGACTTCGCCTGCCTGCTGCACTCGCACCTC 1180212 Query 26050 TTGCTCCACAAACCTTCTCAAG-AGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGAT 26108 || || | || |||| ||| | || || ||||||| || || || |||| Sbjct 1180213 AAGCACCGC--GCC--AGCAAGCAGATCATCCACGAGATCATCACTGACGCCGTCAAGAT 1180268 Query 26109 CGAGAAGGAGTTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACT 26168 |||||||||||| | | ||||||||| | || Sbjct 1180269 CGAGAAGGAGTTCCTCACTGACGCCCTGCCTTGCGCCCTACTCGGCATGAACGCCTCCCT 1180328 Query 26169 CATGAGCCAATACATTGAGTATGTGGCCGACCATCTGC-TGT-GCCAGCTGGGACTCGCC 26226 |||| || |||||||||| ||| ||||| | || | ||| ||| || || || Sbjct 1180329 CATGCAGCAGTACATTGAGTTTGTCGCCGATCGCCTCCTTGTCGCC--CTCGGCAACGAG 1180386 Query 26227 AGACTCTACAGTACGCCTAACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAG 26286 | |||||| | | | ||||| |||||||| ||||| ||||| || ||| || ||| Sbjct 1180387 AAGGTCTACAATGCCACCAACCCCTTCGACTTCATGGAGAACATCTCCCTGGGCGGCAAG 1180446 Query 26287 ACCAACTTCTTTGAAAAGAGGGTCGGCGACTATCA 26321 |||||||||||||| ||| | |||||||| || || Sbjct 1180447 ACCAACTTCTTTGAGAAGCGCGTCGGCGAGTACCA 1180481 Score = 95.1 bits (104), Expect = 2e-14 Identities = 162/233 (70%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| |||||||||||||||| | || |||||| ||||| |||||||| ||| Sbjct 1179578 ATCTGGCAGATGTACAAGAAGGCCGAGGCTTCTTTCTGGACTGCCGAGGAGATTGACCTG 1179637 Query 25537 GCCAAGGACATGGACGGCTGGTAC-GCTCTATC--CAAAGACGAGCAGCATTTTCTCAAG 25593 |||||||| | ||| |||| || | ||| | | |||||| || || || Sbjct 1179638 TCCAAGGACCTCCACGACTGGAACAACCGCATCAACGATGACGAGAAGTTCTTCATCTCT 1179697 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 || | | || ||||| || |||||||| || || || |||||||| ||| |||| | Sbjct 1179698 CACATCCTTGCCTTCTTCGCCGCCTCTGACGGCATTGTCAACGAGAACCTGGTCGAGCGT 1179757 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGAT 25706 |||| | | || || ||| | ||||| || |||||||| |||||||| Sbjct 1179758 TTCAGCGGCGAGGTCCAGATCCCCGAGGCTCGCTGCTTCTACGGCTTCCAGAT 1179810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928841084620800