Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06- 24] 320 sequences; 30,069,354 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq190 132 1e-25 seq25 105 2e-17 seq10 87.8 5e-12 seq64 86.0 2e-11 >seq190 Length=1588703 Score = 132 bits (146), Expect = 1e-25 Identities = 179/247 (72%), Gaps = 2/247 (1%) Strand=Plus/Plus Query 302571 GTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGC 302630 |||||||| ||||| | ||||||||| || |||||||| | || || ||||| Sbjct 820781 GTCTTCCAGGGCCTTGACCAGACGACGCTGGATGTAACCAGTCTCGGCAGTCTTGACAGC 820840 Query 302631 TGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-A 302689 |||||||| ||||| | |||||| |||| || |||||||| | ||| || ||| | Sbjct 820841 GGTATCAATCAGACCCTCGCGACCAGCCATGGCGTGGAAGAAGAACTCGGTGGG-CGTCA 820899 Query 302690 GCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGG 302749 | || | | | ||| |||| ||||| ||||| | ||||||||| | ||| ||| | Sbjct 820900 GACCACGCAGGTACGAGTTCTCGACGAAGCCACGAGACTCGGGCGAGTAATCGTCCTTTG 820959 Query 302750 TAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCT 302809 | ||||| |||||||| | || || ||||| | || ||||||||||| || || ||| Sbjct 820960 TGAAGTGAGGCAGGGTGCGGTACTTGAAGCCGAAGGGAATACGCTTTCCCTCCACCATCT 821019 Query 302810 GCTGTCC 302816 |||| || Sbjct 821020 GCTGACC 821026 >seq25 Length=1334681 Score = 105 bits (116), Expect = 2e-17 Identities = 150/210 (71%), Gaps = 6/210 (3%) Strand=Plus/Plus Query 133451 AAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTG---CGAGTTTTGCTACT 133507 ||||| | |||||||| || | |||||||||||| |||| | | || || Sbjct 1179985 AAGAAGGCCGACTGGGCCATCAGGTGGATCCAGGAC---CGTGACTCCACCTTCGCCCAG 1180041 Query 133508 CGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATT 133567 || || ||||| ||||||| || |||||||| || ||||| || || ||| ||| || Sbjct 1180042 CGCCTGGTTGCATTTGCTGCCGTCGAGGGCATCTTCTTCAGCGGCGCCTTCGCCTCCATC 1180101 Query 133568 TTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCA 133627 || ||||| || ||||||||| | | || || ||| || || ||||| || ||||| Sbjct 1180102 TTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATTTCG 1180161 Query 133628 AGGGACGAGGCACTTCACACCGAATTTGCC 133657 | ||||||| || |||||||| || ||| Sbjct 1180162 CGTGACGAGGGTCTCCACACCGACTTCGCC 1180191 >seq10 Length=2758267 Score = 87.8 bits (96), Expect = 5e-12 Identities = 71/86 (83%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544 ||||| |||| |||||| || |||||||||||||| |||||||| |||||||| || | Sbjct 2657670 GCACCATGTGCAATCATGCAGTCACGCTCCATTTCTCCGAAACGCAGACCACCGTCTCTG 2657729 Query 251545 GCCCTACCCTCGGCAGGCTGACGAGT 251570 || | |||||| ||||||| ||||| Sbjct 2657730 GCACGACCCTCCACAGGCTGTCGAGT 2657755 >seq64 Length=1576225 Score = 86.0 bits (94), Expect = 2e-11 Identities = 121/169 (72%), Gaps = 1/169 (1%) Strand=Plus/Plus Query 251472 GGTGAAGC-GAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAA 251530 || ||||| | || || |||| | || | ||| |||||||||||||| |||| ||| | Sbjct 824575 GGAGAAGCTGCGACGCGCCGTAAGCGATGAGACAGTCACGCTCCATTTCTCCGAGACGCA 824634 Query 251531 GACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGA 251590 |||||||||| || | || |||||||| ||||| || |||||| | | ||| || Sbjct 824635 GACCACCATCACGCGACCGACCCTCGGTGGGCTGGCGGGTGAGAATGGCACGAGGGCCAC 824694 Query 251591 TGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTA 251639 || || || ||| || | ||||| |||||||| |||||||| Sbjct 824695 GAGAACGCGAGTGCATCTTGTCCTGCACCATGTGCTTGAGGCGCTGGTA 824743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471811565547840