Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06-
24] 320 sequences; 30,069,354 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq190 132 1e-25
seq25 105 2e-17
seq10 87.8 5e-12
seq64 86.0 2e-11
>seq190
Length=1588703
Score = 132 bits (146), Expect = 1e-25
Identities = 179/247 (72%), Gaps = 2/247 (1%)
Strand=Plus/Plus
Query 302571 GTCTTCCATACTCTTGATTAAACGACGCTGAATATAACCAGTTGTAGATGTTTTTACAGC 302630
|||||||| ||||| | ||||||||| || |||||||| | || || |||||
Sbjct 820781 GTCTTCCAGGGCCTTGACCAGACGACGCTGGATGTAACCAGTCTCGGCAGTCTTGACAGC 820840
Query 302631 TGTATCAATTAGACCAACACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGT-A 302689
|||||||| ||||| | |||||| |||| || |||||||| | ||| || ||| |
Sbjct 820841 GGTATCAATCAGACCCTCGCGACCAGCCATGGCGTGGAAGAAGAACTCGGTGGG-CGTCA 820899
Query 302690 GCCCCCCAATAAAGGAGCTCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGG 302749
| || | | | ||| |||| ||||| ||||| | ||||||||| | ||| ||| |
Sbjct 820900 GACCACGCAGGTACGAGTTCTCGACGAAGCCACGAGACTCGGGCGAGTAATCGTCCTTTG 820959
Query 302750 TAAAGTGTGGCAGGGTCCTGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCT 302809
| ||||| |||||||| | || || ||||| | || ||||||||||| || || |||
Sbjct 820960 TGAAGTGAGGCAGGGTGCGGTACTTGAAGCCGAAGGGAATACGCTTTCCCTCCACCATCT 821019
Query 302810 GCTGTCC 302816
|||| ||
Sbjct 821020 GCTGACC 821026
>seq25
Length=1334681
Score = 105 bits (116), Expect = 2e-17
Identities = 150/210 (71%), Gaps = 6/210 (3%)
Strand=Plus/Plus
Query 133451 AAGAAATCTGACTGGGCTATTAAATGGATCCAGGACAAGCGTG---CGAGTTTTGCTACT 133507
||||| | |||||||| || | |||||||||||| |||| | | || ||
Sbjct 1179985 AAGAAGGCCGACTGGGCCATCAGGTGGATCCAGGAC---CGTGACTCCACCTTCGCCCAG 1180041
Query 133508 CGTCTCGTTGCTTTTGCTGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATT 133567
|| || ||||| ||||||| || |||||||| || ||||| || || ||| ||| ||
Sbjct 1180042 CGCCTGGTTGCATTTGCTGCCGTCGAGGGCATCTTCTTCAGCGGCGCCTTCGCCTCCATC 1180101
Query 133568 TTTTGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCA 133627
|| ||||| || ||||||||| | | || || ||| || || ||||| || |||||
Sbjct 1180102 TTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATTTCG 1180161
Query 133628 AGGGACGAGGCACTTCACACCGAATTTGCC 133657
| ||||||| || |||||||| || |||
Sbjct 1180162 CGTGACGAGGGTCTCCACACCGACTTCGCC 1180191
>seq10
Length=2758267
Score = 87.8 bits (96), Expect = 5e-12
Identities = 71/86 (83%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 251485 GCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGACCACCATCGCGA 251544
||||| |||| |||||| || |||||||||||||| |||||||| |||||||| || |
Sbjct 2657670 GCACCATGTGCAATCATGCAGTCACGCTCCATTTCTCCGAAACGCAGACCACCGTCTCTG 2657729
Query 251545 GCCCTACCCTCGGCAGGCTGACGAGT 251570
|| | |||||| ||||||| |||||
Sbjct 2657730 GCACGACCCTCCACAGGCTGTCGAGT 2657755
>seq64
Length=1576225
Score = 86.0 bits (94), Expect = 2e-11
Identities = 121/169 (72%), Gaps = 1/169 (1%)
Strand=Plus/Plus
Query 251472 GGTGAAGC-GAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAA 251530
|| ||||| | || || |||| | || | ||| |||||||||||||| |||| ||| |
Sbjct 824575 GGAGAAGCTGCGACGCGCCGTAAGCGATGAGACAGTCACGCTCCATTTCTCCGAGACGCA 824634
Query 251531 GACCACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAGATTAACCATAGGACCGA 251590
|||||||||| || | || |||||||| ||||| || |||||| | | ||| ||
Sbjct 824635 GACCACCATCACGCGACCGACCCTCGGTGGGCTGGCGGGTGAGAATGGCACGAGGGCCAC 824694
Query 251591 TGGAGCGGCTATGTTGCTTATCATTTACCATATGCTTGAGACGCTGGTA 251639
|| || || ||| || | ||||| |||||||| ||||||||
Sbjct 824695 GAGAACGCGAGTGCATCTTGTCCTGCACCATGTGCTTGAGGCGCTGGTA 824743
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471811565547840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |