Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06-
24] 320 sequences; 30,069,354 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq10 129 6e-25
seq64 116 4e-21
seq56 98.7 1e-15
>seq10
Length=2758267
Score = 129 bits (142), Expect = 6e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| ||||| || ||||||||||| || ||||||||||| | |||| || ||| |||
Sbjct 926807 ACCAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCCGACAGGGTGCGACCGTCCTCG 926748
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| || || ||||| || | ||||||||| || || || ||||| || || || |||
Sbjct 926747 AGCTGCTTACCAGCAAAGATAAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGA 926688
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || ||||| ||| | |||||| ||||||||| || || || || || ||
Sbjct 926687 ATCTTGGACTTGACGTTGTCAATGGTGTCGCTCGATTCCACCTCAAGCGTGATCGTCTTG 926628
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || | || || |||||||| |||||
Sbjct 926627 CCAGTGAGCGTCTTGACGAAAATCTGCAT 926599
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | |||||||| ||||| || ||||| || |||||||||||||
Sbjct 926369 CCACCGCGGAGACGGAGGACGAGGTGAAGCGTCGACTCCTTCTGGATGTTGTAGTCGCTC 926310
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| || | || || ||||| || || ||||| |||| |||||||| || || ||
Sbjct 926309 AGAGTACGGCCATCCTCAAGCTGCTTTCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGG 926250
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|| || || || || || || || ||||| ||| | ||||| ||||| || ||
Sbjct 926249 ATACCCTCCTTGTCCTGGATCTTGCTCTTGACGTTGTCGATGGTGTCCGACGACTCGACC 926190
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| || || || ||||| || | || || ||||| || |||||
Sbjct 926189 TCGAGCGTGATAGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 926143
Score = 105 bits (116), Expect = 7e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
||||| | ||| || | |||||||| || ||| ||||| || ||||||||||||
Sbjct 926141 CCTCCACGGAGGCGGAGGACGAGGTGGAGAGTGCTCTCCTTCTGGATGTTGTAGTCGGAG 926082
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| ||| | ||| || ||||| ||||| || ||||| | ||||||||| || || ||
Sbjct 926081 AGCGTGCGGCCGTCCTCAAGCTGCTTGCCAGCGAAAATGAGACGCTGCTGGTCAGGAGGA 926022
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || ||||| ||| | |||||||| || || ||
Sbjct 926021 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAGGACTCGACC 925962
Query 134667 TCGAGAGTAATGGTTTTACCGGT 134689
|| ||||| ||||| || || ||
Sbjct 925961 TCAAGAGTGATGGTCTTGCCAGT 925939
Score = 102 bits (112), Expect = 8e-17
Identities = 148/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564
|| ||||| || || || ||||| |||||||||||||| | | || | || |||
Sbjct 926579 ACCAGGTGCAGAGTCGACTCCTTCTGAATGTTGTAGTCACTCAGAGTACGGCCATCCTCG 926520
Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624
||||| || || || ||||||| |||||||| || || || || || || || || |||
Sbjct 926519 AGCTGCTTTCCGGCGAAAATCAGGCGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGA 926460
Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684
|| || ||||| ||| | || || || || ||||| ||||| || ||||| ||
Sbjct 926459 ATCTTCGACTTGACATTGTCGATAGTATCCGAAGACTCCACCTCGAGGGTGATGGTCTTT 926400
Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
||||| | || || || || || |||||
Sbjct 926399 CCGGTCAGGGTCTTGACAAAGATCTGCAT 926371
>seq64
Length=1576225
Score = 116 bits (128), Expect = 4e-21
Identities = 159/222 (72%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555
|| |||| ||| ||||| || ||||| ||||| || ||||||||||||| | ||| |
Sbjct 136484 AGGCGCAGCACCAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGAGTGCGG 136543
Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCT 134615
|| || ||||| ||||| || || |||| |||||||| || || || || || ||
Sbjct 136544 CCATCCTCAAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGGGGGATACCCTCC 136603
Query 134616 TTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTA 134675
|| || || || || ||||| ||| | |||||||| || ||||| ||||| ||
Sbjct 136604 TTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCGAGGGTG 136663
Query 134676 ATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTG 134717
|| || || || || | || || ||||| || ||||| |||
Sbjct 136664 ATAGTCTTCCCCGTGAGGGTCTTGACGAAGATCTGCATCTTG 136705
>seq56
Length=2470257
Score = 98.7 bits (108), Expect = 1e-15
Identities = 153/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || | ||| || | || ||||| || || || ||||| || ||||||||||||
Sbjct 880796 CCACCACGGAGGCGGAGGACCAGGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAC 880737
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | ||| || ||||| || || || || |||| |||||||| || || ||
Sbjct 880736 AGGGTGCGGCCGTCCTCAAGCTGCTTTCCGGCGAAGATCAGGCGCTGCTGGTCCGGGGGA 880677
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || ||||| ||| | ||||| || || || ||
Sbjct 880676 ATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATGGTGTCCGAGGACTCGACC 880617
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAA 134705
||||| || ||||| || || || | || || ||||||
Sbjct 880616 TCGAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAA 880578
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505396378406400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |