Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Geosmithia_20putterillii_20[genbank_20GCA_5F900188575.1_202017-06-
24] 320 sequences; 30,069,354 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq10 127 7e-24
seq25 113 1e-19
>seq10
Length=2758267
Score = 127 bits (140), Expect = 7e-24
Identities = 371/551 (67%), Gaps = 34/551 (6%)
Strand=Plus/Minus
Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030
|||||| || || ||| | ||||| | ||||||| ||| ||||||||||| || || ||
Sbjct 2184950 CGGCATCATCCCCATGCTGCGTGTCTACAACAACACGGCCCGCTACGTCGACCAGGGTGG 2184891
Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGA---CATTGA 255087
| ||| ||||| || || ||| ||||||||| ||||| ||||||||||| | ||||
Sbjct 2184890 CAACAAGCGCCCCGGTGCCTTCTGCATCTACCTCGAGCCCTGGCACGCCGATGTCTTTGA 2184831
Query 255088 ACGGTTTTTACTGCTGTCCGACAAGA---CCGGCACCGAGGAGCTGATCGCCCGCGACAT 255144
||| | | |||| ||||| ||| | |||||| | |||||||||| |
Sbjct 2184830 ---GTTCCT--CGACCTCCG-CAAGAACCACGGTAAGGAGGAGGTCCGCGCCCGCGACCT 2184777
Query 255145 CTACACCGCTGTCTGGTGCTGCGATCTGTTTATGCGACGCGTGGAACGAGACGA--GAC- 255201
| | ||| ||||| ||| || || || || ||||| ||||| || | |
Sbjct 2184776 GTTCCTCGCCCTCTGGATTCCCGACCTCTTCAT--GAAGCGTG--TCGAGAAGAACGGCG 2184721
Query 255202 -CTGGAGCCTCATGTGTCCCAACTTATCGCCCGGTCTAGTCGACTCTTGGGGTGACGAGT 255260
||||| ||||||||| |||||| | ||||| || | |||| || |||||||
Sbjct 2184720 ACTGGACCCTCATGTGCCCCAACGAGTGCCCCGGCCTGGCCGACGTCCACGGCGACGAGT 2184661
Query 255261 TTGAAAAACTGTATCTGGAGTACGAGCGTGCCGGCCG-GTTCGTACGCCAAGTGCCCGCG 255319
|||| ||||| | |||||||| | | ||||| | || | | | | | | |||
Sbjct 2184660 TTGAGGCTCTGTACGAGAAGTACGAGAGGGAGGGCCGCGGCCGCAAGACGA-TCCGCGCC 2184602
Query 255320 AAGAAGATCTGGAACACGATGGTGCGCATG--CAGCTGGAAACCGGAATGCCGTTCCTAT 255377
||||| | ||| || |||| | || | | ||| || || || | || ||| |
Sbjct 2184601 CAGAAGCTGTGGTACTCGATCCT-CG-AGGCCCAGACCGAGACGGGTAACCCCTTCATGC 2184544
Query 255378 TGCACAAAGACCAC-ATAAACGCACGGTCGAACCAACGCCACCGCGGTACGATACGCGGC 255436
| |||| |||||| || |||| | | ||||| ||| || || || ||| ||
Sbjct 2184543 TCTACAAGGACCACTGCAACCGCAAGAGC-AACCAGAAGAACCTGGGCACCATCCGCAGC 2184485
Query 255437 TCGAACCTGTGCACCGAGATTACGTTGCACACGTCAGCGC---AAGAGGTGGCCGTTTGC 255493
|| |||||||||||||||||| || | || || || | | ||||||||||| |||
Sbjct 2184484 TCCAACCTGTGCACCGAGATT--GTCGAGTAC-TCTGCCCCCGACGAGGTGGCCGTCTGC 2184428
Query 255494 AACTTGGCGTC 255504
||| |||| ||
Sbjct 2184427 AACCTGGCCTC 2184417
Score = 105 bits (116), Expect = 2e-17
Identities = 333/505 (66%), Gaps = 16/505 (3%)
Strand=Plus/Minus
Query 256124 CAGATCGAGGAGCACGGACTGCGCAACTCGCAACGATTGGCGCCCATGCCAACCGCCAGC 256183
||| || |||||||||| ||||||||||| | ||||||||||||| || ||||||
Sbjct 2183998 CAGGTCAAGGAGCACGGCACGCGCAACTCGCTGCTCGTGGCGCCCATGCCCACGGCCAGC 2183939
Query 256184 ACCGCTCAAATCCTGGGTAACGTGGAAAGCATCGAACCCCTGACTACCAACTTCTTCTCG 256243
|| | || |||||||| ||| || || |||| ||| || ||||| ||| ||||
Sbjct 2183938 ACGTCGCAGATCCTGGGCAACAACGAGTGCTTCGAGCCCTACACGTCCAACATCTACTCG 2183879
Query 256244 CGCCGCGTTCGCTCCGGCGAGTTCGCCGTGGTGAACCAGTACTTGGTGGACGACTTGGTA 256303
||||| || | | ||||||||| ||||| |||| | || | | || ||||
Sbjct 2183878 CGCCGTGTCCTGGCTGGCGAGTTCCAGGTGGTCAACCCCTGGCTGCTTAAGGATCTGGT- 2183820
Query 256304 CGA-CTCGGTCTGTGGAACGAGAAGATGCAACAACGCATAATT--CGGGCCCGTGGGTCG 256360
||| ||||| |||||| || ||| | | ||||| ||| || | | || |||
Sbjct 2183819 CGAGCTCGGCCTGTGGTCTGACGCCATGAAGAACCGCATCATTGCCGAGAAC--GGCTCG 2183762
Query 256361 GTGCAGAACATTGAGCGCTTGCCGTTCCGCTTGCGCGAGGTATACCGCACGGTATGGGAG 256420
| |||||||| | | || | | | | | ||| ||||| ||||||
Sbjct 2183761 ATCCAGAACATCCCCAACATCCCCGACGACATCAAGTCGCTCTACAAGACGGTCTGGGAG 2183702
Query 256421 ATGCCGCAACGATTGTTGGTCGACTTGTGCGCAGCACGACAACCGTTTGTGGATCAGTCG 256480
|| |||| || | |||| | || ||| | || | ||| | || ||||||
Sbjct 2183701 ATTTCGCAGCGCCAGGTGGTGCAGATGGCCGCCGACCGCGGTGCCTTTATCGACCAGTCG 2183642
Query 256481 CAAAGCCTCAACCTCTACTTTCCGGTGCCCAACTTTAAACGCTTGACCAAC-GCA--CAC 256537
|| |||||| || || | || ||| || | || || || | ||| |||
Sbjct 2183641 CAGTCGCTCAACATCCACATGAAGG-ACCCGAC--CATGGGCAAGATCACCAGCATGCAC 2183585
Query 256538 TTTTACGGGTGGCGAAAC--GGCCTGAAGACGGGCATGTACTACCTGCGCACCCGACCAG 256595
||| ||| || ||| | || || |||||||||||||||||||||||||||| | |
Sbjct 2183584 TTTGCCGGCTG--GAAGCTGGGTCTCAAGACGGGCATGTACTACCTGCGCACCCAGGCCG 2183527
Query 256596 CGGCCGACCCGATCCAATTCACCGT 256620
| |||| ||| ||||| ||||||||
Sbjct 2183526 CCGCCGCCCCCATCCAGTTCACCGT 2183502
>seq25
Length=1334681
Score = 113 bits (124), Expect = 1e-19
Identities = 129/172 (75%), Gaps = 1/172 (1%)
Strand=Plus/Plus
Query 443696 CAGCTTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAG 443755
|| ||||| | |||| || || || ||||||| ||||| || | || || |||||| |
Sbjct 1180029 CACCTTCGCCCAGCGCCTGGTTGCATTTGCTGCCGTCGAGGGCATCTTCTTCAGCGGC-G 1180087
Query 443756 CTTTAGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTA 443815
| || ||||||||||||||| | || |||||||| || |||| ||| |||||||| |
Sbjct 1180088 CCTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTGATGCCCGGCCTGACCTTCTCCA 1180147
Query 443816 ACGAACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867
|||| || || || ||||||||| | || |||||||||||| || ||
Sbjct 1180148 ACGAGCTCATTTCGCGTGACGAGGGTCTCCACACCGACTTCGCCTGCCTGCT 1180199
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588329487822400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |